SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000788
Gene Symbol: DCK
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.71026696A>G COSM2830471 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-5p ggtgccTGTCTTaac AAAGACAU m6b Created HPSLB_5449_G6655.1_71892402
hsa-miR-4423-3p gGTGCCTATcttaac AUAGGCAC m8a (m8a->m7a) HPSLB_5449_G6655.1_71892402
hsa-miR-4524b-3p ggtgCCTGTCTtaac GAGACAGG m7b Created HPSLB_5449_G6655.1_71892402
hsa-miR-4662a-3p ggtgcCTATCTTaac AAAGAUAG m7b Disrupted HPSLB_5449_G6655.1_71892402
hsa-miR-208b-3p ggtgcctGTCTTAac AUAAGACG m6b Created HPSLB_5449_G6655.1_71892402
hsa-miR-641 ggtgccTGTCTTaac AAAGACAU m6b Created HPSLB_5449_G6655.1_71892402
hsa-miR-6715b-5p gGTGCCTGTcttaac ACAGGCAC m8a (m7a->m8a) HPSLB_5449_G6655.1_71892402
hsa-miR-208a-3p ggtgcctGTCTTAac AUAAGACG m6b Created HPSLB_5449_G6655.1_71892402

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71026684C>A COSM3993769 TCGA-A4-7287-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p ttatcTTAAAGaggt ACUUUAAC m6b Created HPSLB_5449_G6655.1_71892402
hsa-miR-302d-5p ttatcTTAAAGaggt ACUUUAAC m6b Created HPSLB_5449_G6655.1_71892402
hsa-miR-4635 ttatCTTCAAGAggt UCUUGAAG m8a Disrupted HPSLB_5449_G6655.1_71892402
hsa-miR-4699-5p ttATCTTCaagaggt AGAAGAUU m6b Disrupted HPSLB_5449_G6655.1_71892402

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71026675G>A COSM4968107 SJACT008_D [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][non_functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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