SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000788
Gene Symbol: DCK
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.71030507C>A COSN9052007 AOCS-088-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4317 agacGCAATGatctt ACAUUGCC m6b Created HHFCT_119063_cluster-17178_12_295
hsa-miR-5094 agacgCACTGATctt AAUCAGUG m7b Disrupted HHFCT_119063_cluster-17178_12_295
hsa-miR-5694 agacgcaATGATCTt CAGAUCAU m7b Created HHFCT_119063_cluster-17178_12_295

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71025842G>A COSM1328415 TCGA-36-2538-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p atttaCGAGGAAGaa CUUCCUCG m8a Created HHFCT_119056_cluster-17178_3_27
hsa-miR-3679-3p atttacGGGGAAGaa CUUCCCCC m7a Disrupted HHFCT_119056_cluster-17178_3_27
hsa-miR-6763-3p atttaCGGGGAagaa CUCCCCGG m6b Disrupted HHFCT_119056_cluster-17178_3_27

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71025829G>T COSM1178366 SWE-3B [prostate][NS][adenoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3924 tTACATATaatatat AUAUGUAU m7a Created HHFCT_119056_cluster-17178_3_27
hsa-miR-4795-3p ttacatATAATATat AUAUUAUU m7a Created HHFCT_119056_cluster-17178_3_27
hsa-miR-6074 ttacataGAATATat GAUAUUCA m6b Disrupted HHFCT_119056_cluster-17178_3_27
hsa-miR-656-3p ttacatATAATATat AAUAUUAU m7b Created HHFCT_119056_cluster-17178_3_27
hsa-miR-7159-3p ttaCATAGAAtatat UUUCUAUG m7b Disrupted HHFCT_119056_cluster-17178_3_27

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022466A>G COSM1057153 TCGA-BS-A0TA-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1307-5p ctgtctCGGTCGAat UCGACCGG m7a Created HHFCT_119055_cluster-17178_2_1250
hsa-miR-4329 ctGTCTCAGtcgaat CCUGAGAC m7b (m7b->m6b) HHFCT_119055_cluster-17178_2_1250
hsa-miR-4523 ctgTCTCGGTCgaat GACCGAGA m8a Created HHFCT_119055_cluster-17178_2_1250
hsa-miR-4524a-3p CTGTCTCAgtcgaat UGAGACAG m8a Disrupted HHFCT_119055_cluster-17178_2_1250
hsa-miR-6857-3p ctgtCTCAGTCgaat UGACUGAG m7b Disrupted HHFCT_119055_cluster-17178_2_1250

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022465C>T COSM3775961 TCGA-FJ-A3Z7-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-5p ccTGTCTTagtcgaa AAAGACAU m6b Created HHFCT_119055_cluster-17178_2_1250
hsa-miR-4329 cctGTCTCAGtcgaa CCUGAGAC m7b Disrupted HHFCT_119055_cluster-17178_2_1250
hsa-miR-4524a-3p cCTGTCTCAgtcgaa UGAGACAG m8a (m8a->m7a) HHFCT_119055_cluster-17178_2_1250
hsa-miR-4524b-3p CCTGTCTCagtcgaa GAGACAGG m8a Disrupted HHFCT_119055_cluster-17178_2_1250
hsa-miR-641 ccTGTCTTagtcgaa AAAGACAU m6b Created HHFCT_119055_cluster-17178_2_1250
hsa-miR-6857-3p cctgtCTCAGTCgaa UGACUGAG m7b Disrupted HHFCT_119055_cluster-17178_2_1250

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022465C>G COSM3826156 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4329 cctGTCTCAGtcgaa CCUGAGAC m7b Disrupted HHFCT_119055_cluster-17178_2_1250
hsa-miR-4431 cctgtctGAGTCGaa GCGACUCU m6b Created HHFCT_119055_cluster-17178_2_1250
hsa-miR-4524a-3p cCTGTCTCAgtcgaa UGAGACAG m8a (m8a->m7a) HHFCT_119055_cluster-17178_2_1250
hsa-miR-4524b-3p CCTGTCTCagtcgaa GAGACAGG m8a Disrupted HHFCT_119055_cluster-17178_2_1250
hsa-miR-6857-3p cctgtCTCAGTCgaa UGACUGAG m7b Disrupted HHFCT_119055_cluster-17178_2_1250

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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