SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000740
Gene Symbol: CHRM3
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907770C>T COSM906308 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3125 ctacTTCCTCTtaag UAGAGGAA m7b Disrupted HPCB1_2270_G2837.1_240071063
hsa-miR-3185 ctaCTTCTTCTtaag AGAAGAAG m8a Created HPCB1_2270_G2837.1_240071063
hsa-miR-3653-3p ctacttCTTCTTAag CUAAGAAG m7b Created HPCB1_2270_G2837.1_240071063
hsa-miR-3658 ctacttcTTCTTAAg UUUAAGAA m7b Created HPCB1_2270_G2837.1_240071063
hsa-miR-3916 ctacTTCCTCTTaag AAGAGGAA m8a Disrupted HPCB1_2270_G2837.1_240071063
hsa-miR-5197-3p ctactTCTTCTTaag AAGAAGAG m7a Created HPCB1_2270_G2837.1_240071063
hsa-miR-6859-5p ctacTTCCTCTtaag GAGAGGAA m7b Disrupted HPCB1_2270_G2837.1_240071063

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907565C>T COSM3943742 AOCS-171-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-3p atttcGGCAGCTaca AAGCUGCC m7b Disrupted HPCB1_2269_G2836.1_240070863

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907562C>T COSM2049230 TCGA-EI-6917-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4698 ctCATTTTGgcagct UCAAAAUG m7b (m6b->m7b) HPCB1_2269_G2836.1_240070863

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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