SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000740
Gene Symbol: CHRM3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907551G>A COSM2049229 T3092 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-5p gggaaccGTCACTCa UGAGUGAC m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-218-1-3p gGGAACCATcactca AUGGUUCC m8a (m7a->m8a) HHFCT_16028_cluster-1138_6_8
hsa-miR-218-2-3p ggGAACCATcactca CAUGGUUC m7b (m6b->m7b) HHFCT_16028_cluster-1138_6_8
hsa-miR-4765 gggaaccATCACTCa UGAGUGAU m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-758-5p gggAACCATCactca GAUGGUUG m7a Created HHFCT_16028_cluster-1138_6_8
hsa-miR-8069 gggAACCATCactca GGAUGGUU m7b Created HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907545G>A COSM141851 39T [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p gccCCCGGGaaccgt CCCCGGGA m6b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-4532 gcCCCCGGGaaccgt CCCCGGGG m7b (m7b->m6b) HHFCT_16028_cluster-1138_6_8
hsa-miR-597-3p gcccccGAGAACCgt UGGUUCUC m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-6070 gcccccgGGAACCGt CCGGUUCC m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6727-5p gcCCCCGAGaaccgt CUCGGGGC m7a (m6a->m7a) HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907542C>T COSM1742564 Esp66 [urinary_tract][bladder][carcinoma][transitional_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p gctgccCCCGGGaac CCCCGGGA m6b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-3616-3p gcTGCCCTCGggaac CGAGGGCA m8a Created HHFCT_16028_cluster-1138_6_8
hsa-miR-4436b-3p gCTGCCCTcgggaac CAGGGCAG m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-4532 gctgcCCCCGGGaac CCCCGGGG m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-4632-5p gCTGCCCTCgggaac GAGGGCAG m8a (m7a->m8a) HHFCT_16028_cluster-1138_6_8
hsa-miR-4740-3p gctgccCTCGGGaac GCCCGAGA m6b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-486-3p gCTGCCCCcgggaac CGGGGCAG m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6735-5p gCTGCCCTcgggaac CAGGGCAG m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-6879-5p gCTGCCCTcgggaac CAGGGCAG m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-7843-5p gCTGCCCTCgggaac GAGGGCAG m8a (m7a->m8a) HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907533G>T COSM358359 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3173-5p cgatGCAGGGCtgcc UGCCCUGC m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6779-3p cgatgCAGGGCTgcc AAGCCCUG m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6799-3p cgatGCAGGGCtgcc UGCCCUGC m7b Disrupted HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907525C>T COSM141850 34T [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3179 agCCCCTTCgatgca AGAAGGGG m7b (m6b->m7b) HHFCT_16028_cluster-1138_6_8
hsa-miR-3184-5p aGCCCCTCcgatgca UGAGGGGC m7b Disrupted HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907520C>T COSM1320336 TCGA-42-2590-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1249-5p tacacagTCCCTCCg AGGAGGGA m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-185-3p tacaCAGCCCCTccg AGGGGCUG m8a Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-3126-5p tacacaGTCCCTCcg UGAGGGAC m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-3184-5p tacacaGCCCCTCcg UGAGGGGC m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-3199 tacaCAGTCCCTccg AGGGACUG m8a Created HHFCT_16028_cluster-1138_6_8
hsa-miR-423-5p tacacaGCCCCTCcg UGAGGGGC m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-4675 tacACAGCCCCtccg GGGGCUGU m8a Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-4741 tacACAGCCCctccg CGGGCUGU m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6085 tacacAGCCCCTccg AAGGGGCU m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6797-5p tacacagTCCCTCCg AGGAGGGA m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-6813-5p tacacAGCCCCTccg CAGGGGCU m7b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-6875-5p tacacaGTCCCTCcg UGAGGGAC m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-7974 taCACAGCCcctccg AGGCUGUG m7b (m7b->m6b) HHFCT_16028_cluster-1138_6_8
hsa-miR-8052 tacaCAGTCCCtccg CGGGACUG m7b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-892a tACACAGTccctccg CACUGUGU m7b Created HHFCT_16028_cluster-1138_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.239907514A>T COSM533747 TCGA-44-3918-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1257 cctggATTCACagcc AGUGAAUG m6b Created HHFCT_16028_cluster-1138_6_8
hsa-miR-223-5p cctggATACACagcc CGUGUAUU m6b Disrupted HHFCT_16028_cluster-1138_6_8
hsa-miR-3713 cctGGATACacagcc GGUAUCCG m6b Disrupted HHFCT_16028_cluster-1138_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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