SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000712
Gene Symbol: BLVRA
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807081T>C COSM3832811 TCGA-A7-A4SD-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-483-3p gtAGGAGTGAataag UCACUCCU m8a Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-6794-3p gtagGAGTGAataag CUCACUCU m6b Disrupted HHRBC_11928_BC3-2of3-SCL_2202

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807061G>T COSM1246135 ESO-0061 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-515-5p ccTTGGAGAAtgtgc UUCUCCAA m8a Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-519d-5p ccTTGGAGaatgtgc CCUCCAAA m6b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-519e-5p ccTTGGAGAAtgtgc UUCUCCAA m8a Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-5695 cCTTGGAGaatgtgc ACUCCAAG m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807054C>G COSM4929846 TCGA-G3-A6UC-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-5p TCTGGGTGcttggag CACCCAGA m8a Created HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-500b-3p tCTGGGTGCttggag GCACCCAG m8a (m7a->m8a) HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-6816-3p tctgGGTCCTTggag GAAGGACC m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-6830-5p tctgggTCCTTGGag CCAAGGAA m7a Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-6871-3p tctGGGTGCTtggag CAGCACCC m7b Created HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-711 tcTGGGTCCttggag GGGACCCA m7b (m7b->m6b) HHRBC_11928_BC3-2of3-SCL_2202

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807050G>T COSM1549803 TCGA-44-7661-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-5p caagTCTGGGTcctt CACCCAGA m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-1912 caagTCTGGGTcctt UACCCAGA m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-711 caagtcTGGGTCCtt GGGACCCA m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-8087 cAAGTCTTggtcctt GAAGACUU m7b Created HHRBC_11928_BC3-2of3-SCL_2202

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807048C>G COSM3832810 TCGA-GM-A2D9-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-5p ttcaagtGTGGGTCc GGACCCAC m7b Created HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-1295b-5p ttcaagTCTGGGTcc CACCCAGA m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-1912 ttcaagTCTGGGTcc UACCCAGA m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-216b-3p ttcAAGTGTGggtcc ACACACUU m7b Created HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-499b-5p ttcAAGTCTGggtcc ACAGACUU m7b Disrupted HHRBC_11928_BC3-2of3-SCL_2202
hsa-miR-7114-3p ttcaagtGTGGGTCc UGACCCAC m7b Created HHRBC_11928_BC3-2of3-SCL_2202

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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