SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000712
Gene Symbol: BLVRA
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807020A>C COSM3881130 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807019A>G COSM1450845 TCGA-F4-6569-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-26b-3p taaaacgGAACAGat CCUGUUCU m6b Created HHFCT_146348_uc003tir.1_7_12
hsa-miR-1468-5p taAAACGGAacagat CUCCGUUU m7b (m6b->m7b) HHFCT_146348_uc003tir.1_7_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807017C>T COSM79143 TCGA-24-0982-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p tctAAAATGaaacag ACAUUUUC m6b Created HHFCT_146348_uc003tir.1_7_12
hsa-miR-153-5p tctAAAATGAaacag UCAUUUUU m7a Created HHFCT_146348_uc003tir.1_7_12
hsa-miR-5696 tctaAAATGAaacag CUCAUUUA m6b Created HHFCT_146348_uc003tir.1_7_12
hsa-miR-579-3p tctaAAATGAAacag UUCAUUUG m7a Created HHFCT_146348_uc003tir.1_7_12
hsa-miR-664b-3p tctaAAATGAAacag UUCAUUUG m7a Created HHFCT_146348_uc003tir.1_7_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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