SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000572
Gene Symbol: IL10
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.206768675C>T COSM2152401 TCGA-06-0939 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7852-3p tcatcaACTACATAg UAUGUAGU m8a Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-3668 tcatcaaCTACATag AAUGUAGA m6b Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-380-3p tcatcaATTACATAg UAUGUAAU m8a Created HPCB3_2197_G2958.1_206942023
hsa-miR-4495 tcatcaaTTACATag AAUGUAAA m6b Created HPCB3_2197_G2958.1_206942023
hsa-miR-4703-3p tcatCAACTACAtag UGUAGUUG m8a Disrupted HPCB3_2197_G2958.1_206942023

Mutation Mutation ID Sample Name Cancer Type
chr1:g.206768673A>G COSM3943389 AOCS-057-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7852-3p atcaACTACATAgaa UAUGUAGU m8a Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-3668 atcaaCTACATagaa AAUGUAGA m6b Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-4703-3p atCAACTACAtagaa UGUAGUUG m8a Disrupted HPCB3_2197_G2958.1_206942023

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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