SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000551
Gene Symbol: VHL
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10151619T>C COSN229626
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-3p tttTCATTTaacttt CAAAUGAG m6b Disrupted HPSLC_12736_G15071.1_10193304
hsa-miR-3646 ttTTCATTTaacttt AAAAUGAA m7b (m7b->m6b) HPSLC_12736_G15071.1_10193304

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150796G>A COSN2535353
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p tattaatGGACAAat AUUGUCCU m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-3912-5p tattaATGGACAaat AUGUCCAU m7b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-4477a taTTAATAGacaaat CUAUUAAG m7a (m6a->m7a) HPSLC_12735_G15070.1_10192470
hsa-miR-4646-3p tattaatGGACAAat AUUGUCCC m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-4796-5p tattaATAGACAaat UGUCUAUA m7a Created HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150794A>G COSN2535352
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3912-5p agtattaATGGACAa AUGUCCAU m7b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-4436b-5p agtattAGTGGACaa GUCCACUU m7a Created HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150789T>C COSN2535351
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p attatAGCATTAAtg UUAAUGCU m8a Created HPSLC_12735_G15070.1_10192470
hsa-miR-200b-3p attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-200c-3p attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-374c-5p attataGTATTAatg AUAAUACA m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-429 attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-625-3p atTATAGTattaatg GACUAUAG m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-655-3p attataGTATTAatg AUAAUACA m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-8084 attaTAGTATTaatg GAAUACUA m7b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-155-5p attatAGCATTAAtg UUAAUGCU m8a Created HPSLC_12735_G15070.1_10192470
hsa-miR-200b-3p attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-200c-3p attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-374c-5p attataGTATTAatg AUAAUACA m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-429 attatAGTATTAatg UAAUACUG m7a Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-625-3p atTATAGTattaatg GACUAUAG m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-655-3p attataGTATTAatg AUAAUACA m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-8084 attaTAGTATTaatg GAAUACUA m7b Disrupted HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150786T>C COSN2535349
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 ttgatTACAGTatta CACUGUAG m6b Created HPSLC_12735_G15070.1_10192470
hsa-miR-200b-3p ttgattaCAGTATTa UAAUACUG m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-200c-3p ttgattaCAGTATTa UAAUACUG m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-3607-3p ttgaTTACAGTatta ACUGUAAA m7a Created HPSLC_12735_G15070.1_10192470
hsa-miR-429 ttgattaCAGTATTa UAAUACUG m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-625-3p ttgatTATAGTatta GACUAUAG m6b Disrupted HPSLC_12735_G15070.1_10192470
hsa-miR-8084 ttgattaTAGTATTa GAAUACUA m7b Disrupted HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150785A>G COSN229630
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-625-3p tttgatTATAGTatt GACUAUAG m6b Disrupted HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150784T>C COSN2535348
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-625-3p gtttgatTATAGTat GACUAUAG m6b Disrupted HPSLC_12735_G15070.1_10192470
Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150782A>C COSN1902139 RK061_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150781G>T COSN2535347
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p catgtttTATTATag AAUAAUAC m6b Created HPSLC_12735_G15070.1_10192470
hsa-miR-374a-5p catgtttTATTATAg UUAUAAUA m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-374b-5p catgtttTATTATAg AUAUAAUA m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-5692b catgtttTATTATag AAUAAUAU m6b Created HPSLC_12735_G15070.1_10192470
hsa-miR-5692c catgtttTATTATag AAUAAUAU m6b Created HPSLC_12735_G15070.1_10192470
Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150778T>C COSN2535346
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150776T>C COSN2535344
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150772T>C COSN2535342
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1290 gAAAATCCgcatgtt UGGAUUUU m7b Created HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150768A>C COSN2535341
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4273 acGAGAACAtctgca GUGUUCUC m7b (m6b->m7b) HPSLC_12735_G15070.1_10192470
hsa-miR-7156-5p acGAGAACAtctgca UUGUUCUC m7b (m6b->m7b) HPSLC_12735_G15070.1_10192470

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150767A>G COSN2535340
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p tacgagaGAATCTGc ACAGAUUC m7b Created HPSLC_12735_G15070.1_10192470
hsa-miR-3615 taCGAGAGAatctgc UCUCUCGG m7a (m6a->m7a) HPSLC_12735_G15070.1_10192470
hsa-miR-4768-5p tacGAGAGAATctgc AUUCUCUC m8a Created HPSLC_12735_G15070.1_10192470
hsa-miR-6833-3p tacGAGAGAAtctgc UUUCUCUC m7b Created HPSLC_12735_G15070.1_10192470

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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