SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000544
Gene Symbol: TAP2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32838198G>A COSM4804525 CHC1915T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-497-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4756-5p CCTCCCTGctgctgg CAGGGAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4441 cCTCCCTGctgctgg ACAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-424-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-3619-5p cctcCCTGCTGctgg UCAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-3162-5p cCTCCCTActgctgg UUAGGGAG m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-214-3p cctcCCTGCTGctgg ACAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6754-5p cCTCCCTGctgctgg CCAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-761 cctcCCTGCTGCtgg GCAGCAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6838-5p cctcccTGCTGCTgg AAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6510-5p cctCCCTGCTGctgg CAGCAGGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6754-5p cCTCCCTGctgctgg CCAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6510-5p cctCCCTGCTGctgg CAGCAGGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-497-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4756-5p CCTCCCTGctgctgg CAGGGAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-195-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-16-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15b-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15a-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-1321 CCTCCCTGctgctgg CAGGGAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-761 cctcCCTGCTGCtgg GCAGCAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6838-5p cctcccTGCTGCTgg AAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15a-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15b-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-16-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-195-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-214-3p cctcCCTGCTGctgg ACAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-3162-5p cCTCCCTActgctgg UUAGGGAG m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-3619-5p cctcCCTGCTGctgg UCAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-424-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4441 cCTCCCTGctgctgg ACAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4756-5p CCTCCCTGctgctgg CAGGGAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-497-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6510-5p cctCCCTGCTGctgg CAGCAGGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6754-5p cCTCCCTGctgctgg CCAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6838-5p cctcccTGCTGCTgg AAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-761 cctcCCTGCTGCtgg GCAGCAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-1321 CCTCCCTGctgctgg CAGGGAGG m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15a-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-15b-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-16-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-195-5p cctcccTGCTGCTgg UAGCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-214-3p cctcCCTGCTGctgg ACAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-3162-5p cCTCCCTActgctgg UUAGGGAG m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-3619-5p cctcCCTGCTGctgg UCAGCAGG m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-424-5p cctcccTGCTGCTGg CAGCAGCA m8a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-4441 cCTCCCTGctgctgg ACAGGGAG m7b Disrupted HHFCT_132943_cluster-19805_6_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32838190T>C COSM4784289 TCGA-AZ-5407-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p ctGCTGGTGgacgcg UCACCAGC m7b (m7b->m6b) HHFCT_132943_cluster-19805_6_9
hsa-miR-4733-3p ctgCTGGTGGacgcg CCACCAGG m7a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6084 ctgcTGGCGGAcgcg UUCCGCCA m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-634 cTGCTGGTggacgcg AACCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-1226-3p ctGCTGGTGgacgcg UCACCAGC m7b (m7b->m6b) HHFCT_132943_cluster-19805_6_9
hsa-miR-4733-3p ctgCTGGTGGacgcg CCACCAGG m7a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6084 ctgcTGGCGGAcgcg UUCCGCCA m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-634 cTGCTGGTggacgcg AACCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-1226-3p ctGCTGGTGgacgcg UCACCAGC m7b (m7b->m6b) HHFCT_132943_cluster-19805_6_9
hsa-miR-4733-3p ctgCTGGTGGacgcg CCACCAGG m7a Disrupted HHFCT_132943_cluster-19805_6_9
hsa-miR-6084 ctgcTGGCGGAcgcg UUCCGCCA m7b Created HHFCT_132943_cluster-19805_6_9
hsa-miR-634 cTGCTGGTggacgcg AACCAGCA m7b Disrupted HHFCT_132943_cluster-19805_6_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837816A>G COSM4907828 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3943 gatgtGGGGGCTgct UAGCCCCC m7b Created HHFCT_132942_cluster-19805_5_111
hsa-miR-3943 gatgtGGGGGCTgct UAGCCCCC m7b Created HHFCT_132942_cluster-19805_5_111
hsa-miR-3943 gatgtGGGGGCTgct UAGCCCCC m7b Created HHFCT_132942_cluster-19805_5_111

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837788T>A COSM4732163 T2940 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHFCT_132942_cluster-19805_5_111

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837785C>T COSM4891871 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHFCT_132942_cluster-19805_5_111
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHFCT_132942_cluster-19805_5_111
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHFCT_132942_cluster-19805_5_111
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHFCT_132942_cluster-19805_5_111
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHFCT_132942_cluster-19805_5_111
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHFCT_132942_cluster-19805_5_111
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHFCT_132942_cluster-19805_5_111

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser