SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000519 |
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Gene Symbol: | HBD |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.5234053A>G | COSM4787493 | CHC1545T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-106a-5p | caaggGCACTTTTtc | AAAAGUGC | m8a | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-106b-5p | caaggGCACTTTttc | UAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-1249-3p | cAAGGGCGctttttc | ACGCCCUU | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-17-5p | caaggGCACTTTttc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-20a-5p | caaggGCACTTTttc | UAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-20b-5p | caaggGCACTTTttc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-371b-3p | caaGGGCACTTtttc | AAGUGCCC | m8a | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-518a-3p | caaggGCGCTTTttc | GAAAGCGC | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-518b | caaggGCGCTTTttc | CAAAGCGC | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-518c-3p | caaggGCGCTTTttc | CAAAGCGC | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-518d-3p | caaggGCGCTTTttc | CAAAGCGC | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-518f-3p | caaggGCGCTTTttc | GAAAGCGC | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-519d-3p | caaggGCACTTTttc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-526b-3p | caaggGCACTTTttc | GAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-548az-5p | caagggCACTTTTtc | CAAAAGUG | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-548t-5p | caagggCACTTTTtc | CAAAAGUG | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-93-5p | caaggGCACTTTttc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.5234051T>G | COSM292910 | TCGA-AA-3678-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-106a-5p | aggGCACTTTTtctc | AAAAGUGC | m8a | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-106b-5p | aggGCACTTTttctc | UAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-17-5p | aggGCACTTTttctc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-20a-5p | aggGCACTTTttctc | UAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-20b-5p | aggGCACTTTttctc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-371b-3p | aGGGCACTTtttctc | AAGUGCCC | m8a | (m8a->m7a) | HPCB1_7420_G9361.1_5255297 |
hsa-miR-424-3p | agggcACGTTTTctc | CAAAACGU | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-519d-3p | aggGCACTTTttctc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-526b-3p | aggGCACTTTttctc | GAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-548az-5p | agggCACTTTTtctc | CAAAAGUG | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-548t-5p | agggCACTTTTtctc | CAAAAGUG | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-93-5p | aggGCACTTTttctc | CAAAGUGC | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.5234047T>C | COSM1253981 | ESO-1608 | [oesophagus][lower_third][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3915 | cacttTTCCTCAgct | UUGAGGAA | m7b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-3928-3p | cacttTTCCTCagct | GGAGGAAC | m6b | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-4251 | cactttTTCTCAGct | CCUGAGAA | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-4496 | cactTTTCCTCagct | GAGGAAAC | m7a | Created | HPCB1_7420_G9361.1_5255297 |
hsa-miR-539-5p | cacttTTTCTCagct | GGAGAAAU | m6b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-6124 | caCTTTTCCtcagct | GGGAAAAG | m7b | (m6b->m7b) | HPCB1_7420_G9361.1_5255297 |
hsa-miR-7160-5p | cacttttCCTCAGCt | UGCUGAGG | m7b | Created | HPCB1_7420_G9361.1_5255297 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.5234046C>A | COSM927852 | TCGA-BS-A0UV-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4251 | actttTTCTCAGctg | CCUGAGAA | m7b | Disrupted | HPCB1_7420_G9361.1_5255297 |
hsa-miR-539-5p | acttTTTCTCagctg | GGAGAAAU | m6b | Disrupted | HPCB1_7420_G9361.1_5255297 |