SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000479
Gene Symbol: AMH
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.2250448CTG>C COSM4612903 LIM1215 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p gaggtCACTGTGAcgag UCACAGUG m8a Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-216a-3p gaggtCACTGTGAcgag UCACAGUG m8a Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-223-3p gaggtcACTGACgag UGUCAGUU m6b Created HHFCT_77529_uc002lvh.2_4_8
hsa-miR-27a-3p gaggtcACTGTGAcgag UUCACAGU m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-27b-3p gaggtcACTGTGAcgag UUCACAGU m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-3681-3p gaggtCACTGTGacgag ACACAGUG m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-4697-3p gaggtCACTGACgag UGUCAGUG m7b Created HHFCT_77529_uc002lvh.2_4_8
hsa-miR-5190 gagGTCACTGtgacgag CCAGUGAC m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-4276 gaggTCACTGAcgag CUCAGUGA m7b Created HHFCT_77529_uc002lvh.2_4_8

Mutation Mutation ID Sample Name Cancer Type
chr19:g.2250433C>A COSM1392112 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4640-5p cctgggcCTGGCCCt UGGGCCAG m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-4726-5p cctgggcCTGGCCCt AGGGCCAG m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-4755-3p cctggGCCTGGCcct AGCCAGGC m7b Disrupted HHFCT_77529_uc002lvh.2_4_8
hsa-miR-6508-3p cctgggcATGGCCCt UGGGCCAU m7b Created HHFCT_77529_uc002lvh.2_4_8
hsa-miR-6872-3p cctgGGCATGGccct CCCAUGCC m7b Created HHFCT_77529_uc002lvh.2_4_8

Mutation Mutation ID Sample Name Cancer Type
chr19:g.2249930G>T COSN1213090 HCC122T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4320 ccccGAATCCCagct GGGAUUCU m7a Created HHFCT_77528_uc002lvh.2_2_9
hsa-miR-378g ccccgaAGCCCAGct ACUGGGCU m7b Disrupted HHFCT_77528_uc002lvh.2_2_9
hsa-miR-27a-5p ccccgAAGCCCagct AGGGCUUA m6b Disrupted HHFCT_77528_uc002lvh.2_2_9
hsa-miR-6506-5p ccccgaATCCCAGct ACUGGGAU m7b Created HHFCT_77528_uc002lvh.2_2_9
hsa-miR-619-5p ccccgaATCCCAGCt GCUGGGAU m8a Created HHFCT_77528_uc002lvh.2_2_9
hsa-miR-5089-5p ccccgAATCCCAgct GUGGGAUU m7b Created HHFCT_77528_uc002lvh.2_2_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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