SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000454
Gene Symbol: SOD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667357C>T COSM1307728 TCGA-DK-A3IT-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1322 attGCATCATtggcc GAUGAUGC m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667349C>T COSM4382236 262LT [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aggagacCATTGCAt CUGCAAUG m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4474-5p agGAGACTAttgcat UUAGUCUC m7b (m6b->m7b) HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-6843-3p agGAGACCATtgcat AUGGUCUC m8a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-6848-3p agGAGACCAttgcat GUGGUCUC m7b (m7b->m6b) HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667349C>A COSM1030068 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aggagacCATTGCAt CUGCAAUG m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-6843-3p agGAGACCATtgcat AUGGUCUC m8a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-6848-3p agGAGACCAttgcat GUGGUCUC m7b (m7b->m6b) HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667341C>G COSM3799849 TCGA-DK-A3X1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 tcactCTCAGGAGac CUCCUGAG m8a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-1976 tcactctCAGGAGac CCUCCUGC m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-3653-5p tcactcTCAGGAGac CCUCCUGA m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-378a-5p tcactcTCAGGAGac CUCCUGAC m7a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4251 tcacTCTCAGGagac CCUGAGAA m7a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4279 tcactctGAGGAGAc CUCUCCUC m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4324 tcacTCTCAGGagac CCCUGAGA m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4329 tcacTCTCAGGagac CCUGAGAC m7a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4330 tcacTCTGAGGagac CCUCAGAU m7a Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4693-3p tCACTCTCAggagac UGAGAGUG m8a (m8a->m7a) HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-544b tcactCTCAGGagac ACCUGAGG m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-5586-3p TCACTCTGaggagac CAGAGUGA m8a Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-6761-5p tcaCTCTCAGgagac UCUGAGAG m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-759 tCACTCTGaggagac GCAGAGUG m7b Created HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667333C>G COSM444362 TCGA-A2-A04W-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-5p ctgtgatGTCACTCt UGAGUGAC m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-3913-3p ctgTGATGTCactct AGACAUCA m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-489-3p ctgtGATGTCACtct GUGACAUC m8a Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-499a-3p ctGTGATGTcactct AACAUCAC m7b (m6b->m7b) HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-499b-3p ctGTGATGTcactct AACAUCAC m7b (m6b->m7b) HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667288T>C COSM4789002 CHC1598T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tgaCTGCTGacaaag ACAGCAGG m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4274 tGACTGCTGacaaag CAGCAGUC m8a (m8a->m7a) HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4291 tgaCTGCTGAcaaag UUCAGCAG m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4519 tgACTGCTGacaaag CAGCAGUG m7a (m7a->m6a) HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-761 tgaCTGCTGacaaag GCAGCAGG m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-922 tgaCTGCTGacaaag GCAGCAGA m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667286G>A COSM1030067 TCGA-BG-A0MG-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-3p tgtgACTACTGacaa ACAGUAGU m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-199b-3p tgtgACTACTGacaa ACAGUAGU m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-214-3p tgtgaCTGCTGacaa ACAGCAGG m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-222-5p tgtgaCTACTGAcaa CUCAGUAG m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-223-3p tgtgactACTGACAa UGUCAGUU m7a Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-3129-5p tgtgACTACTGacaa GCAGUAGU m7b Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4274 tgtGACTGCTGacaa CAGCAGUC m8a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4291 tgtgaCTGCTGAcaa UUCAGCAG m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4519 tgtgACTGCTGacaa CAGCAGUG m7a Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4697-3p tgtgactACTGACAa UGUCAGUG m7a Created HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-4704-3p tGTGACTGctgacaa UCAGUCAC m7b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-761 tgtgaCTGCTGacaa GCAGCAGG m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-922 tgtgaCTGCTGacaa GCAGCAGA m6b Disrupted HHRBC_8241_BC3-2of3-SCL_5235
hsa-miR-936 tgtgaCTACTGacaa ACAGUAGA m6b Created HHRBC_8241_BC3-2of3-SCL_5235

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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