SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000416
Gene Symbol: IFNGR1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.137198367T>AGT COSM1073784 TCGA-BG-A18B-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 gagagagTTCTTCac AGAAGAAG m6b Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4511 gagagAGTTCTTCac GAAGAACU m8a Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4680-5p gagAGAGTTCTtcac AGAACUCU m8a Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-7110-3p GAGAGAGAgttcttcac UCUCUCUC m8a Created HPSEF_20464_G24697.1_137519492
hsa-miR-6873-3p gAGAGAGAgttcttcac UUCUCUCU m7b Created HPSEF_20464_G24697.1_137519492

Mutation Mutation ID Sample Name Cancer Type
chr6:g.137198367AGT>T COSM1073785 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7110-3p GAGAGAGAgttcttcac UCUCUCUC m8a Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-6873-3p gAGAGAGAgttcttcac UUCUCUCU m7b Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4511 gagagagAGTTCTTCac GAAGAACU m8a Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4680-5p gagagAGAGTTCTtcac AGAACUCU m8a Disrupted HPSEF_20464_G24697.1_137519492

Mutation Mutation ID Sample Name Cancer Type
chr6:g.137198365C>G COSM97837 325 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 gagagTTCTTCacct AGAAGAAG m6b Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4511 gagAGTTCTTCacct GAAGAACU m8a Disrupted HPSEF_20464_G24697.1_137519492
hsa-miR-4680-5p gAGAGTTCTtcacct AGAACUCU m8a (m8a->m7a) HPSEF_20464_G24697.1_137519492

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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