SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000414
Gene Symbol: HSD17B4
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119541983G>A COSM5003454 PDA_100 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.119541972T>C COSM4570030 CSCC-18-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p atgattcTTAAAGac ACUUUAAC m6b Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-302d-5p atgattcTTAAAGac ACUUUAAC m6b Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-3653-3p atgaTTCTTAaagac CUAAGAAG m6b Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-3658 atgaTTCTTAAAgac UUUAAGAA m8a Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-6507-5p atgATTCTTaaagac GAAGAAUA m6b Disrupted HHFCT_129643_cluster-18185_19_17

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119541968A>G COSM1060008 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p tcagATGATTCttaa CGAAUCAU m7b Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-4511 tcagatgGTTCTTaa GAAGAACU m6b Created HHFCT_129643_cluster-18185_19_17
hsa-miR-452-3p tCAGATGAttcttaa CUCAUCUG m7b Disrupted HHFCT_129643_cluster-18185_19_17
hsa-miR-548b-3p tcagatGGTTCTTaa CAAGAACC m7b Created HHFCT_129643_cluster-18185_19_17
hsa-miR-6507-5p tcagatgATTCTTaa GAAGAAUA m6b Disrupted HHFCT_129643_cluster-18185_19_17

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119535975A>C COSN5067728 HX21T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p tgctgtgAAGTATGa ACAUACUU m7b Disrupted HHFCT_129641_cluster-18185_17_12
hsa-miR-412-3p tgctGTGAAGTatga ACUUCACC m7a Disrupted HHFCT_129641_cluster-18185_17_12
hsa-miR-4418 tgctgTGCAGTatga CACUGCAG m6b Created HHFCT_129641_cluster-18185_17_12
hsa-miR-6807-3p tgctgTGCAGTatga CACUGCAU m6b Created HHFCT_129641_cluster-18185_17_12

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119526018A>G COSM1130959 71 [endometrium][NS][hyperplasia][complex]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302f caagGCAATTAaggt UAAUUGCU m7a Disrupted HHFCT_129640_cluster-18185_16_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119526003T>C COSM202281 TCGA-AA-A00A-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p tgatGTGCCAAGatt CUUGGCAC m8a Created HHFCT_129640_cluster-18185_16_14
hsa-miR-4643 tgATGTGTCaagatt GACACAUG m7a (m7a->m6a) HHFCT_129640_cluster-18185_16_14
hsa-miR-514a-3p tgatGTGTCAAgatt AUUGACAC m7b Disrupted HHFCT_129640_cluster-18185_16_14
hsa-miR-514b-3p tgatGTGTCAAgatt AUUGACAC m7b Disrupted HHFCT_129640_cluster-18185_16_14
hsa-miR-642a-3p tgATGTGTCaagatt AGACACAU m7b (m7b->m6b) HHFCT_129640_cluster-18185_16_14
hsa-miR-642b-3p tgATGTGTCaagatt AGACACAU m7b (m7b->m6b) HHFCT_129640_cluster-18185_16_14
hsa-miR-96-5p tgatGTGCCAAgatt UUUGGCAC m7b Created HHFCT_129640_cluster-18185_16_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119525980A>G COSM4127348 TCGA-BR-4279-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-5p gtgTTACAGCagttt AGCUGUAA m7b Disrupted HHFCT_129640_cluster-18185_16_14
hsa-miR-4718 gtgtTACAGCagttt AGCUGUAC m6b Disrupted HHFCT_129640_cluster-18185_16_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119502077C>T COSM1060001 TCGA-A5-A0GI-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p atataAACCACTtcc CAGUGGUU m7b Disrupted HHFCT_129636_cluster-18185_12_13
hsa-miR-4795-5p atataaaCCACTTCc AGAAGUGG m7b Disrupted HHFCT_129636_cluster-18185_12_13
hsa-miR-8062 atataAATCACTtcc CAGUGAUU m7b Created HHFCT_129636_cluster-18185_12_13

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119502060A>G COSM3134593 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1278 gagCAGTACTtagag UAGUACUG m7b Disrupted HHFCT_129636_cluster-18185_12_13

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119499346A>G COSM3393086 8035740 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4694-3p tcccTCCATTTtctt CAAAUGGA m7b Disrupted HHFCT_129635_cluster-18185_11_16
hsa-miR-4802-5p tcCCTCCATtttctt UAUGGAGG m7b (m7b->m6b) HHFCT_129635_cluster-18185_11_16
hsa-miR-6515-5p tCCCTCCAttttctt UUGGAGGG m7b Disrupted HHFCT_129635_cluster-18185_11_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119493900G>A COSM4561742 CSCC-17-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3180-5p aCTGGAAGaagatct CUUCCAGA m7a Disrupted HHFCT_129634_cluster-18185_10_8
hsa-miR-4778-3p actgGAAGAAGAtct UCUUCUUC m8a Disrupted HHFCT_129634_cluster-18185_10_8
hsa-miR-6875-3p actGGAAGAAgatct AUUCUUCC m7b Disrupted HHFCT_129634_cluster-18185_10_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119493883G>C COSM3975131 TCGA-HT-7689-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-5p tgaggCACTCAaggc GUGAGUGG m6b Created HHFCT_129634_cluster-18185_10_8
hsa-miR-1909-5p tgaGGCACTCAaggc UGAGUGCC m8a Created HHFCT_129634_cluster-18185_10_8
hsa-miR-3136-5p tgaggCAGTCAaggc CUGACUGA m6b Disrupted HHFCT_129634_cluster-18185_10_8
hsa-miR-33b-3p tgAGGCACTcaaggc CAGUGCCU m7b (m6b->m7b) HHFCT_129634_cluster-18185_10_8
hsa-miR-4439 tgaggCAGTCAaggc GUGACUGA m6b Disrupted HHFCT_129634_cluster-18185_10_8
hsa-miR-4658 tgaggCACTCAaggc GUGAGUGU m6b Created HHFCT_129634_cluster-18185_10_8
hsa-miR-4758-5p tgaggCACTCAaggc GUGAGUGG m6b Created HHFCT_129634_cluster-18185_10_8
hsa-miR-5002-3p tgaGGCAGTCAaggc UGACUGCC m8a Disrupted HHFCT_129634_cluster-18185_10_8
hsa-miR-515-3p tgAGGCACTCaaggc GAGUGCCU m8a Created HHFCT_129634_cluster-18185_10_8
hsa-miR-519e-3p tgAGGCACTcaaggc AAGUGCCU m7b (m6b->m7b) HHFCT_129634_cluster-18185_10_8
hsa-miR-6790-5p tgaggCACTCAaggc GUGAGUGU m6b Created HHFCT_129634_cluster-18185_10_8
hsa-miR-943 tgaggCAGTCAaggc CUGACUGU m6b Disrupted HHFCT_129634_cluster-18185_10_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser