SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000393
Gene Symbol: COL5A2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.189036708C>T COSM160139 PD4197a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 agcaaacCCATCCag GGGAUGGU m6b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-1255a agcaaaCTCATCCag AGGAUGAG m7b Created HHFCT_84988_cluster-14031_2_8
hsa-miR-1255b-5p agcaaaCTCATCCag CGGAUGAG m7b Created HHFCT_84988_cluster-14031_2_8
hsa-miR-432-3p agcaaacCCATCCAg CUGGAUGG m7b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-6839-3p agcAAACCCAtccag UUGGGUUU m7b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-5087 agCAAACCCatccag GGGUUUGU m7a (m7a->m6a) HHFCT_84988_cluster-14031_2_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.189036704C>T COSM1691723 YUPROST [skin][neck][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-3p aacccatCCAGTGTa AACACUGG m7b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-1193 aacCCATCCagtgta GGGAUGGU m6b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-1243 aacccATCCAGTgta AACUGGAU m7b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-4506 aACCCATTcagtgta AAAUGGGU m7b Created HHFCT_84988_cluster-14031_2_8
hsa-miR-432-3p aacCCATCCAGtgta CUGGAUGG m8a Disrupted HHFCT_84988_cluster-14031_2_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.189036689A>C COSM1404014 TCGA-AA-3510-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-5p ccacgtAAAACCTgg GAGGUUUU m7b Disrupted HHFCT_84988_cluster-14031_2_8
hsa-miR-3613-5p ccacGTACAACctgg UGUUGUAC m7b Created HHFCT_84988_cluster-14031_2_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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