SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000337
Gene Symbol: SGCD
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.156435604G>A COSN9413570 AOCS-170-1-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-5p tgtatccGCTCTTGa UCAAGAGC m7b Disrupted HPSLB_5945_G7255.1_155862614
hsa-miR-3681-5p tgtATCCACTcttga UAGUGGAU m7b Created HPSLB_5945_G7255.1_155862614
hsa-miR-376b-5p tgTATCCACtcttga CGUGGAUA m7b (m6b->m7b) HPSLB_5945_G7255.1_155862614
hsa-miR-376c-5p tgTATCCACtcttga GGUGGAUA m7b (m6b->m7b) HPSLB_5945_G7255.1_155862614
hsa-miR-6849-5p tgtATCCACTCttga GAGUGGAU m8a Created HPSLB_5945_G7255.1_155862614
hsa-miR-335-5p tgtatccGCTCTTGa UCAAGAGC m7b Disrupted HPSLB_5945_G7255.1_155862614
hsa-miR-3681-5p tgtATCCACTcttga UAGUGGAU m7b Created HPSLB_5945_G7255.1_155862614
hsa-miR-376b-5p tgTATCCACtcttga CGUGGAUA m7b (m6b->m7b) HPSLB_5945_G7255.1_155862614
hsa-miR-376c-5p tgTATCCACtcttga GGUGGAUA m7b (m6b->m7b) HPSLB_5945_G7255.1_155862614
hsa-miR-6849-5p tgtATCCACTCttga GAGUGGAU m8a Created HPSLB_5945_G7255.1_155862614

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser