SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000313
Gene Symbol: PROS1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.93898523T>C COSM289175 TCGA-AG-3909-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4703-3p gtgtCAACTACcctg UGUAGUUG m7b Created HHFCT_105477_cluster-16643_4_11
hsa-miR-514a-3p GTGTCAATtaccctg AUUGACAC m8a Disrupted HHFCT_105477_cluster-16643_4_11
hsa-miR-514b-3p GTGTCAATtaccctg AUUGACAC m8a Disrupted HHFCT_105477_cluster-16643_4_11
hsa-miR-6755-5p gtgtcaaCTACCCTg UAGGGUAG m7b Created HHFCT_105477_cluster-16643_4_11

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93898519C>A COSM3824703 TCGA-AC-A2BK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6837-5p caattaCCCTGGagg ACCAGGGC m6b Disrupted HHFCT_105477_cluster-16643_4_11
hsa-miR-199a-5p caattACACTGGagg CCCAGUGU m7b Created HHFCT_105477_cluster-16643_4_11
hsa-miR-199b-5p caattACACTGGagg CCCAGUGU m7b Created HHFCT_105477_cluster-16643_4_11
hsa-miR-4302 caattACACTGGagg CCAGUGUG m7a Created HHFCT_105477_cluster-16643_4_11
hsa-miR-4685-5p caattaCCCTGGagg CCCAGGGC m6b Disrupted HHFCT_105477_cluster-16643_4_11
hsa-miR-3925-3p caattacACTGGAGg ACUCCAGU m7b Created HHFCT_105477_cluster-16643_4_11

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93898487G>T COSM1048923 TCGA-73-7499-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6875-3p atgGGAAGAAaggat AUUCUUCC m7b Disrupted HHFCT_105477_cluster-16643_4_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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