SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000291
Gene Symbol: PGK1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104366T>G COSM4111213 TCGA-BR-8591-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 ctgACGCGGGacaag GCCCGCGU m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-198 ctgacgCTGGACaag GGUCCAGA m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-3912-5p ctgacgcTGGACAag AUGUCCAU m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4433b-5p ctgacgcGGGACAag AUGUCCCA m6b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4449 ctgacgCGGGACaag CGUCCCGG m6b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4646-3p ctgacgcGGGACAAg AUUGUCCC m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4738-5p ctgaCGCTGGacaag ACCAGCGC m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280

Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104363C>T COSM4480246 CSCC-32-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-338-3p aagctgATGCTGGAc UCCAGCAU m8a Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4530 aagctgaTGCTGGac CCCAGCAG m6b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4711-5p aagCTGATGCtggac UGCAUCAG m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4738-5p aagctgaCGCTGGac ACCAGCGC m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280

Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104351C>G COSM3845438 TCGA-BH-A0B6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520d-5p tcgCTTTGTAacaag CUACAAAG m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-524-5p tcgCTTTGTAacaag CUACAAAG m7b Created HHRBL_15501_BCBL1-2of3-SCL_280

Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104313G>A COSN9097836 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-5p aatcacCAACCTCTc AGAGGUUG m8a Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-598-5p aATCACCGacctctc GCGGUGAU m7b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-6086 aatcacCAACCTCtc GGAGGUUG m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104281C>T COSN1085233 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104274C>A COSN9097835 AOCS-116-1-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104258C>T COSN1085234 TCGA-B5-A11N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-3p ccgcatTCTGCAagc CUGCAGAC m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-1468-3p ccgcATTTTGCaagc AGCAAAAU m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-298 ccgcaTTCTGCaagc AGCAGAAG m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-3678-3p ccgcatTCTGCAagc CUGCAGAG m6b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-4698 ccgCATTTTGcaagc UCAAAAUG m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-518a-5p ccgcatTTTGCAagc CUGCAAAG m6b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-527 ccgcatTTTGCAagc CUGCAAAG m6b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-548aj-5p ccgcaTTTTGCAagc UGCAAAAG m7a Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-548aw ccgcaTTTTGCAagc GUGCAAAA m7b Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-548f-5p ccgcaTTTTGCAagc UGCAAAAG m7a Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-548g-5p ccgcaTTTTGCAagc UGCAAAAG m7a Created HHRBL_15501_BCBL1-2of3-SCL_280
hsa-miR-548x-5p ccgcaTTTTGCAagc UGCAAAAG m7a Created HHRBL_15501_BCBL1-2of3-SCL_280

Mutation Mutation ID Sample Name Cancer Type
chrX:g.78104255A>T COSN1085235 TCGA-BG-A0VW-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6850-5p gTTCCGCAttctgca GUGCGGAA m7b Disrupted HHRBL_15501_BCBL1-2of3-SCL_280

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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