SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000262
Gene Symbol: NAGA
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.42060995A>G COSM4705430 T3080 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4746-5p cagctgcGGGACCGa CCGGUCCC m7b Created HPTK1_19944_G23732.1_42457000
hsa-miR-3158-5p cagCTGCAGGaccga CCUGCAGA m7a Disrupted HPTK1_19944_G23732.1_42457000
hsa-miR-4281 cagctgCGGGACCga GGGUCCCG m7b Created HPTK1_19944_G23732.1_42457000
hsa-miR-5047 cAGCTGCAggaccga UUGCAGCU m7b Disrupted HPTK1_19944_G23732.1_42457000
hsa-miR-6886-5p cagCTGCGGGaccga CCCGCAGG m7a Created HPTK1_19944_G23732.1_42457000
hsa-miR-1184 caGCTGCAGGaccga CCUGCAGC m8a Disrupted HPTK1_19944_G23732.1_42457000

Mutation Mutation ID Sample Name Cancer Type
chr22:g.42060983C>T COSM4457379 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-5p cgatATGTCTTatcg AAAGACAU m7b Created HPTK1_19944_G23732.1_42457000
hsa-miR-3714 cgataTGCCTTatcg GAAGGCAG m6b Disrupted HPTK1_19944_G23732.1_42457000
hsa-miR-3910 cgatATGCCTTatcg AAAGGCAU m7b Disrupted HPTK1_19944_G23732.1_42457000
hsa-miR-641 cgatATGTCTTatcg AAAGACAU m7b Created HPTK1_19944_G23732.1_42457000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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