SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000186
Gene Symbol: CFH
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.196715654G>T COSM3943239 AOCS-135-8-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p ggtttAATCTGaatg ACAGAUUC m6b Created HHFCT_14174_cluster-951_8_8
hsa-miR-302a-5p gGTTTAAGctgaatg ACUUAAAC m7b Disrupted HHFCT_14174_cluster-951_8_8
hsa-miR-3942-3p ggtttaATCTGAAtg UUUCAGAU m7b Created HHFCT_14174_cluster-951_8_8
hsa-miR-892c-5p ggtttaaTCTGAATg UAUUCAGA m7b Created HHFCT_14174_cluster-951_8_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196715653A>C COSM1248142 ESO-0079 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302a-5p tgGTTTAAGctgaat ACUUAAAC m7b (m7b->m6b) HHFCT_14174_cluster-951_8_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196715645A>G COSM4026513 TCGA-BR-A4CQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-5p actTCACATGgttta GCAUGUGA m7b Disrupted HHFCT_14174_cluster-951_8_8
hsa-miR-3611 aCTTCACAtggttta UUGUGAAG m7b Disrupted HHFCT_14174_cluster-951_8_8
hsa-miR-497-3p acttcacGTGGTTTa CAAACCAC m7b Created HHFCT_14174_cluster-951_8_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196715639C>A COSM424918 TCGA-A7-A0CG-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1257 aaaatgaATTCACat AGUGAAUG m6b Created HHFCT_14174_cluster-951_8_8
hsa-miR-183-3p aaaatgAATTCACat GUGAAUUA m7a Created HHFCT_14174_cluster-951_8_8
hsa-miR-3611 aaaatgaCTTCACAt UUGUGAAG m7b Disrupted HHFCT_14174_cluster-951_8_8
hsa-miR-4452 aaaatGAATTCAcat UUGAAUUC m7b Created HHFCT_14174_cluster-951_8_8
hsa-miR-4760-3p aaaATGAATTcacat AAAUUCAU m7b Created HHFCT_14174_cluster-951_8_8
hsa-miR-664a-3p aaAATGAATtcacat UAUUCAUU m7b (m6b->m7b) HHFCT_14174_cluster-951_8_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196713840A>G COSM243655 PR-01-1934 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 ctaggATGTGTaaca GACACAUG m6b Created HHFCT_14173_cluster-951_7_8
hsa-miR-466 ctaggATGTGTAaca AUACACAU m7b Created HHFCT_14173_cluster-951_7_8
hsa-miR-4789-3p ctaggATGTGTaaca CACACAUA m6b Created HHFCT_14173_cluster-951_7_8
hsa-miR-5580-3p ctaggATATGTaaca CACAUAUG m6b Disrupted HHFCT_14173_cluster-951_7_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673026C>T COSM4458290 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3914 acaGGTTCCTggtct AAGGAACC m7b Disrupted HHFCT_14167_cluster-951_1_8
hsa-miR-649 ACAGGTTTctggtct AAACCUGU m8a Created HHFCT_14167_cluster-951_1_8
hsa-miR-873-5p acagGTTCCTGgtct GCAGGAAC m7b Disrupted HHFCT_14167_cluster-951_1_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673023G>A COSM1200880 587270 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3914 ctgacaGGTTCCTgg AAGGAACC m7b Disrupted HHFCT_14167_cluster-951_1_8
hsa-miR-649 ctgACAGGTTcctgg AAACCUGU m7b Disrupted HHFCT_14167_cluster-951_1_8
hsa-miR-873-5p ctgacagGTTCCTGg GCAGGAAC m7b Disrupted HHFCT_14167_cluster-951_1_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673017T>G COSM1248153 ESO-157 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6748-3p gaaattcGGACAGGt UCCUGUCC m7b Created HHFCT_14167_cluster-951_1_8
Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673017T>C COSM1248154 ESO-708 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673013A>C COSM1248147 ESO-085 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p tacAGAACTTctgac AAAGUUCU m7b Created HHFCT_14167_cluster-951_1_8
hsa-miR-148b-5p taCAGAACTTctgac AAGUUCUG m8a Created HHFCT_14167_cluster-951_1_8
hsa-miR-6874-3p taCAGAACTtctgac CAGUUCUG m7b (m6b->m7b) HHFCT_14167_cluster-951_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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