SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000147
Gene Symbol: FUCA1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.23854409G>A COSM906443 TCGA-76-4928-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-3p ggcTATCATCgtgac UGAUGAUA m7b Created HHFKP_1199_cluster-1349_9_11
Mutation Mutation ID Sample Name Cancer Type
chr1:g.23854407C>T COSM4425944 227 [thyroid][NS][carcinoma][anaplastic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23848675A>T COSM1667261 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p ggGTGCAATGggaaa CAUUGCAC m8a Disrupted HHFKP_1198_cluster-1349_8_20
hsa-miR-32-5p ggGTGCAATgggaaa UAUUGCAC m7b (m7b->m6b) HHFKP_1198_cluster-1349_8_20
hsa-miR-363-3p ggGTGCAATgggaaa AAUUGCAC m7b (m7b->m6b) HHFKP_1198_cluster-1349_8_20
hsa-miR-367-3p ggGTGCAATgggaaa AAUUGCAC m7b (m7b->m6b) HHFKP_1198_cluster-1349_8_20
hsa-miR-501-3p gGGTGCATTgggaaa AAUGCACC m8a (m7a->m8a) HHFKP_1198_cluster-1349_8_20
hsa-miR-502-3p gGGTGCATTgggaaa AAUGCACC m8a (m7a->m8a) HHFKP_1198_cluster-1349_8_20
hsa-miR-92a-3p ggGTGCAATgggaaa UAUUGCAC m7b (m7b->m6b) HHFKP_1198_cluster-1349_8_20
hsa-miR-92b-3p ggGTGCAATgggaaa UAUUGCAC m7b (m7b->m6b) HHFKP_1198_cluster-1349_8_20

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23845816A>T COSM361349 LUAD-CHTN-Z4716A [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-5p gtgGTCCTCAgatcc GUGAGGAC m7b Created HHFKP_1196_cluster-1349_6_8
hsa-miR-134-3p gtggtCCACAGatcc CCUGUGGG m6b Disrupted HHFKP_1196_cluster-1349_6_8
hsa-miR-3200-5p gtggtcCTCAGATcc AAUCUGAG m7b Created HHFKP_1196_cluster-1349_6_8
hsa-miR-4535 gtGGTCCACagatcc GUGGACCU m7a (m7a->m6a) HHFKP_1196_cluster-1349_6_8
hsa-miR-4751 gtGGTCCTCagatcc AGAGGACC m7b (m6b->m7b) HHFKP_1196_cluster-1349_6_8
hsa-miR-4776-5p gTGGTCCACagatcc GUGGACCA m8a (m8a->m7a) HHFKP_1196_cluster-1349_6_8
hsa-miR-4800-5p gtGGTCCACagatcc AGUGGACC m7b (m7b->m6b) HHFKP_1196_cluster-1349_6_8
hsa-miR-7114-5p gtggTCCACAGAtcc UCUGUGGA m8a Disrupted HHFKP_1196_cluster-1349_6_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23845813G>A COSM3486126 TCGA-IH-A3EA-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p gtCCACAGatccaga CCUGUGGG m6b Disrupted HHFKP_1196_cluster-1349_6_8
hsa-miR-3167 gtccacAAATCCaga AGGAUUUC m6b Created HHFKP_1196_cluster-1349_6_8
hsa-miR-378j gtccacaAATCCAGa ACUGGAUU m7b Created HHFKP_1196_cluster-1349_6_8
hsa-miR-4752 gTCCACAAatccaga UUGUGGAU m7a Created HHFKP_1196_cluster-1349_6_8
hsa-miR-6839-5p gtccacaAATCCAGa UCUGGAUU m7b Created HHFKP_1196_cluster-1349_6_8
hsa-miR-7114-5p gTCCACAGAtccaga UCUGUGGA m8a (m8a->m7a) HHFKP_1196_cluster-1349_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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