SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000109
Gene Symbol: DMD
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chrX:g.33262784A>C COSN2354788 RK007_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548l ggaaATACTTTTtag AAAAGUAU m8a Created HPSEF_24149_G29297.1_33280915
hsa-miR-548c-3p ggaaataATTTTTag CAAAAAUC m6b Disrupted HPSEF_24149_G29297.1_33280915
hsa-miR-548n ggaaaTACTTTTtag CAAAAGUA m7b Created HPSEF_24149_G29297.1_33280915
hsa-miR-944 ggaAATAATTTttag AAAUUAUU m8a Disrupted HPSEF_24149_G29297.1_33280915

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser