SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000046
Gene Symbol: ARSB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780517C>T COSM3074490 TCGA-EE-A2A2-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4504 ctcacaTTGTCACAa UGUGACAA m8a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-542-3p ctcacatTGTCACAa UGUGACAG m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-8066 cTCACATTGtcacaa CAAUGUGA m8a (m7a->m8a) HHFCT_123247_cluster-18634_10_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780516G>T COSM1194220 H358 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3611 tcacatCTTCACAAa UUGUGAAG m8a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4426 tcaCATCTTCacaaa GAAGAUGG m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4647 tcaCATCTTCacaaa GAAGAUGG m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4699-5p tcacATCTTCacaaa AGAAGAUU m6b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-576-3p tCACATCTTcacaaa AAGAUGUG m8a (m7a->m8a) HHFCT_123247_cluster-18634_10_8
hsa-miR-6808-3p tcacatcGTCACAaa GUGUGACC m6b Disrupted HHFCT_123247_cluster-18634_10_8
hsa-miR-758-3p tcacatcGTCACAAa UUUGUGAC m7b Disrupted HHFCT_123247_cluster-18634_10_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780516G>A COSM196736 pfg180T [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 tcaCATCATCacaaa GAUGAUGA m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-1322 tcaCATCATCacaaa GAUGAUGC m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-6808-3p tcacatcGTCACAaa GUGUGACC m6b Disrupted HHFCT_123247_cluster-18634_10_8
hsa-miR-758-3p tcacatcGTCACAAa UUUGUGAC m7b Disrupted HHFCT_123247_cluster-18634_10_8
hsa-miR-8070 tcacatcATCACAaa AUGUGAUU m6b Created HHFCT_123247_cluster-18634_10_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780498C>T COSM266044 TCGA-AA-3672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 cctGTCCTGCctaca UGCAGGAC m7b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-1910-3p cctgtcCTGCCTaca GAGGCAGA m6b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-2682-5p cctgtcCTGCCTaca CAGGCAGU m6b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4436a ccTGTCCTGCctaca GCAGGACA m8a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4736 cctgtCCTGCCTaca AGGCAGGU m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-4763-3p cctgtCCTGCCTaca AGGCAGGG m7a Created HHFCT_123247_cluster-18634_10_8
hsa-miR-5000-3p ccTGTCCTGcctaca UCAGGACA m7b (m6b->m7b) HHFCT_123247_cluster-18634_10_8
hsa-miR-6511a-5p cctgtcCTGCCTaca CAGGCAGA m6b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-663a cctgtCCCGCCTaca AGGCGGGG m7a Disrupted HHFCT_123247_cluster-18634_10_8
hsa-miR-6806-5p cctgtccTGCCTACa UGUAGGCA m7b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-6808-5p cctgtCCTGCCTaca CAGGCAGG m7b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-6893-5p cctgtCCTGCCTaca CAGGCAGG m7b Created HHFCT_123247_cluster-18634_10_8
hsa-miR-940 cctgtCCTGCCTaca AAGGCAGG m7b Created HHFCT_123247_cluster-18634_10_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780495C>T COSM1329435 TCGA-04-1651-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 gtcccgcCTACAGTt CACUGUAG m7b Disrupted HHFCT_123247_cluster-18634_10_8
hsa-miR-663a gtCCCGCCTacagtt AGGCGGGG m7a (m7a->m6a) HHFCT_123247_cluster-18634_10_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser