SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001286568
Gene Symbol: ZRANB3
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.135528551T>C COSN6210465 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499a-3p aaTGATGTTatgtgt AACAUCAC m7a (m7a->m6a) HHFKP_77774_cluster-13919_12_8
hsa-miR-499b-3p aaTGATGTTatgtgt AACAUCAC m7a (m7a->m6a) HHFKP_77774_cluster-13919_12_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.135525978A>G COSN6210463 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-202-3p tttagATACCTCatg AGAGGUAU m7b Disrupted HPRT3_15220_G20176.1_136283552
hsa-miR-4458 tttagaTACCTCatg AGAGGUAG m6b Disrupted HPRT3_15220_G20176.1_136283552
hsa-let-7d-5p tttagaTACCTCatg AGAGGUAG m6b Disrupted HPRT3_15220_G20176.1_136283552

Mutation Mutation ID Sample Name Cancer Type
chr2:g.135511414G>A COSN8607507 699_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3120-5p tgatCAGACAGttgt CCUGUCUG m7b Created HHFKP_77773_cluster-13919_11_329

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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