SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0071016
Gene Symbol: ZNF330
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.141234499A>G COSN5053639 HX28T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p gatAAGTATGTttta ACAUACUU m8a Disrupted HHKTA_32630_NM_014487|1694|1733|2.24993293469137|0.982410369972659
hsa-miR-216b-3p gatAAGTGTGTttta ACACACUU m8a Created HHKTA_32630_NM_014487|1694|1733|2.24993293469137|0.982410369972659
hsa-miR-603 gataAGTGTGTttta CACACACU m7b Created HHKTA_32630_NM_014487|1694|1733|2.24993293469137|0.982410369972659

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141233927A>C COSM1051512 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p gtttactCATTTGAa UCAAAUGC m7a Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-1252-3p gtttaCTCATTTGaa CAAAUGAG m8a Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-7853-5p gtttactCATTTGAa UCAAAUGC m7a Created HHFCT_120572_uc003iiq.2_7_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141233906G>A COSM1309764 TCGA-DK-A1AC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-1-3p agATACTGagtcatc CCAGUAUU m6b Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-4797-3p agaTACTGAGtcatc UCUCAGUA m7b Disrupted HHFCT_120572_uc003iiq.2_7_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141233904C>T COSM3409070 TCGA-32-5222-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-1-3p tcagATACTGagtca CCAGUAUU m6b Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-16-2-3p tcagATATTGagtca CCAAUAUU m6b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-195-3p tcagATATTGagtca CCAAUAUU m6b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-4797-3p tcagaTACTGAGtca UCUCAGUA m7b Disrupted HHFCT_120572_uc003iiq.2_7_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141233891A>G COSM290559 TCGA-AG-A026-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3183 aggcAGAGAGGattc GCCUCUCU m7b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-4723-3p aggcAGAGAGGattc CCCUCUCU m7b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-5001-3p AGGCAGAAaggattc UUCUGCCU m8a Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-500a-5p aggcagaAAGGATTc UAAUCCUU m7b Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-501-5p aggcagAAAGGATTc AAUCCUUU m8a Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-544a agGCAGAAaggattc AUUCUGCA m6b Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-6738-3p aGGCAGAAaggattc CUUCUGCC m7b Disrupted HHFCT_120572_uc003iiq.2_7_8
hsa-miR-6769b-3p aggcAGAGAGGattc CCCUCUCU m7b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-6817-3p aggCAGAGAGgattc UCUCUCUG m7b Created HHFCT_120572_uc003iiq.2_7_8
hsa-miR-7111-3p aggcaGAGAGGATtc AUCCUCUC m8a Created HHFCT_120572_uc003iiq.2_7_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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