SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_014487
Gene Symbol: ZNF330
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230239C>A COSM3825252 TCGA-AC-A3OD-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p aagCCAGCTGccagg UCAGCUGG m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-3126-3p aaGCCAGATGccagg CAUCUGGC m8a Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-4642 aagccaGATGCCAgg AUGGCAUC m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-4720-5p aagccagATGCCAGg CCUGGCAU m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-4799-3p aagccagATGCCAGg ACUGGCAU m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-5580-5p aAGCCAGCtgccagg UGCUGGCU m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-5588-5p aagccagATGCCAGg ACUGGCAU m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-6868-5p aagccagCTGCCAGg ACUGGCAG m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-885-3p aagccaGCTGCCagg AGGCAGCG m6b Disrupted HHFKP_111388_uc003iiq.2_7_34

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230224T>A COSM447421 TCGA-AR-A1AI-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-5p atcaatTAGAGCatc CGCUCUAG m6b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-372-5p atcaATTTGAGcatc CCUCAAAU m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-4735-5p atcAATTAGagcatc CCUAAUUU m6b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-6502-5p atcaatTAGAGCatc AGCUCUAG m6b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-7158-5p atcaatTTGAGCatc GGCUCAAU m6b Disrupted HHFKP_111388_uc003iiq.2_7_34

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230212A>G COSM480904 TCGA-A3-3387-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HPCB1_29749_G37994.1_142151359
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HPCB1_29749_G37994.1_142151359
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HPCB3_17048_G23404.1_142151359
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HPCB3_17048_G23404.1_142151359
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-141-5p tctgtGAAGATGatc CAUCUUCC m7a Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-412-3p tctGTGAAGatgatc ACUUCACC m6b Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-4793-5p tctgtgAGGATGatc ACAUCCUG m6b Created HPRO6_57699_G68868.1_142151360
hsa-miR-5196-3p tctgtGAGGATGAtc UCAUCCUC m8a Created HPRO6_57699_G68868.1_142151360
hsa-miR-6837-3p tctGTGAAGatgatc CCUUCACU m6b Disrupted HPRO6_57699_G68868.1_142151360

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230209T>G COSM1271282 ESO-177 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HPCB1_29749_G37994.1_142151359
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HPCB3_17048_G23404.1_142151359
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HPRO6_57699_G68868.1_142151360
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-141-5p ttctctgGGAAGATg CAUCUUCC m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-412-3p ttctctGTGAAGatg ACUUCACC m6b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-6837-3p ttctctGTGAAGatg CCUUCACU m6b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230207T>C COSM4186381 BK0023 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HHFCT_120570_uc003iiq.2_5_32
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HHFKP_111388_uc003iiq.2_7_34
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HPCB1_29749_G37994.1_142151359
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HPCB3_17048_G23404.1_142151359
hsa-miR-3919 ctTTCTCTGtgaaga GCAGAGAA m7b (m7b->m6b) HPRO6_57699_G68868.1_142151360

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230198A>C COSM4743536 T684 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HPCB1_29749_G37994.1_142151359
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HPCB1_29749_G37994.1_142151359
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HPCB1_29749_G37994.1_142151359
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HPCB3_17048_G23404.1_142151359
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HPCB3_17048_G23404.1_142151359
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HPCB3_17048_G23404.1_142151359
hsa-miR-183-5p tTGCCATAactttct UAUGGCAC m7a Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-3609 ttgccaTCACTTTct CAAAGUGA m7b Created HPRO6_57699_G68868.1_142151360
hsa-miR-548ah-5p ttgccaTCACTTTct AAAAGUGA m7b Created HPRO6_57699_G68868.1_142151360
hsa-miR-548at-5p ttgccaTAACTTTct AAAAGUUA m7b Disrupted HPRO6_57699_G68868.1_142151360
hsa-miR-8074 ttGCCATAactttct CUAUGGCG m6b Disrupted HPRO6_57699_G68868.1_142151360

Mutation Mutation ID Sample Name Cancer Type
chr4:g.141230187CT>C COSM1633468 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3133 agttGTTCTTTttgcc UAAAGAAC m7b Disrupted HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548aj-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548f-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548g-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-548x-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFCT_120570_uc003iiq.2_5_32
hsa-miR-3133 agttGTTCTTTttgcc UAAAGAAC m7b Disrupted HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548aj-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548f-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548g-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-548x-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHFKP_111388_uc003iiq.2_7_34
hsa-miR-3133 agttGTTCTTTttgcc UAAAGAAC m7b Disrupted HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548aj-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548f-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548g-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-548x-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHKTA_43041_NM_014487|647|686|1.73071764207028|0.982410369972659
hsa-miR-3133 agttGTTCTTTttgcc UAAAGAAC m7b Disrupted HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548aj-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548f-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548g-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629
hsa-miR-548x-5p agttgttCTTTTGCc UGCAAAAG m7b Created HHRBL_10978_BCBL1-2of3-SCL_7629

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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