SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0011540
Gene Symbol: ZMYM4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.35372098G>T COSN1444250 RK046_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4766-3p cacatgTTGCTAaaa AUAGCAAU m6b Created HHFKP_9510_cluster-291_6_105
hsa-miR-4662a-5p cacatgTGGCTAAaa UUAGCCAA m7a Disrupted HHFKP_9510_cluster-291_6_105
hsa-miR-449b-3p cacaTGTGGCTaaaa CAGCCACA m7b Disrupted HHFKP_9510_cluster-291_6_105
hsa-miR-374b-3p cacatgtTGCTAAaa CUUAGCAG m6b Created HHFKP_9510_cluster-291_6_105

Mutation Mutation ID Sample Name Cancer Type
chr1:g.35370542T>G COSM1185402 LC_C35 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6081 attCTGCTCCacact AGGAGCAG m7b Disrupted HPTK1_409_G483.1_35836149
hsa-miR-644a attctgcGCCACACt AGUGUGGC m7b Created HPTK1_409_G483.1_35836149
hsa-miR-6722-5p attcTGCGCCacact AGGCGCAC m6b Created HPTK1_409_G483.1_35836149
hsa-miR-7847-3p attctgCTCCACact CGUGGAGG m6b Disrupted HPTK1_409_G483.1_35836149
hsa-miR-4468 atTCTGCTCcacact AGAGCAGA m7b (m7b->m6b) HPTK1_409_G483.1_35836149
hsa-miR-3911 attctgcTCCACACt UGUGUGGA m7b Disrupted HPTK1_409_G483.1_35836149

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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