SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_005095
Gene Symbol: ZMYM4
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.35420029G>T COSN1444261 RK194_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6769b-3p tAGAGAGGtagcttt CCCUCUCU m7b Disrupted HHFKP_9522_cluster-291_19_11
hsa-miR-4723-3p tAGAGAGGtagcttt CCCUCUCU m7b Disrupted HHFKP_9522_cluster-291_19_11
hsa-miR-618 tagAGAGTTagcttt AAACUCUA m6b Created HHFKP_9522_cluster-291_19_11
hsa-miR-6800-3p taGAGAGGTagcttt CACCUCUC m7b (m7b->m6b) HHFKP_9522_cluster-291_19_11

Mutation Mutation ID Sample Name Cancer Type
chr1:g.35419674T>C COSM908687 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-5p taTCAGATTaaaacg AAUCUGAG m7a (m7a->m6a) HHKTA_41536_NM_005095|4722|4761|1.8172535241738|0.444763429956833
hsa-miR-4474-5p tatcAGACTAAaacg UUAGUCUC m7a Created HHKTA_41536_NM_005095|4722|4761|1.8172535241738|0.444763429956833

Mutation Mutation ID Sample Name Cancer Type
chr1:g.35280260A>G COSN7990629 ASHPC_0015_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p agagaGAAAGAGaga ACUCUUUC m7b Disrupted HHRBC_302_BC3-2of3-SCL_11898
hsa-miR-4753-3p agagagAAAGAGAga UUCUCUUU m7b Disrupted HHRBC_302_BC3-2of3-SCL_11898
hsa-miR-4768-5p aGAGAGAAagagaga AUUCUCUC m7b Disrupted HHRBC_302_BC3-2of3-SCL_11898
hsa-miR-6833-3p aGAGAGAAAgagaga UUUCUCUC m8a (m8a->m7a) HHRBC_302_BC3-2of3-SCL_11898
hsa-miR-6873-3p AGAGAGAAagagaga UUCUCUCU m8a Disrupted HHRBC_302_BC3-2of3-SCL_11898
hsa-miR-7110-3p agagaGAGAGAGAga UCUCUCUC m8a Created HHRBC_302_BC3-2of3-SCL_11898

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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