SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_020338
Gene Symbol: ZMIZ1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.79306224CCC>CTT COSM4516943 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4505 catgagtCCCAGCCaga AGGCUGGG m7b Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-4432 catGAGTCTTagccaga AAAGACUC m7b Created HPRT3_3537_G4617.1_81065974
hsa-miR-365b-5p catgAGTCCCagccaga AGGGACUU m6b Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-365a-5p catgAGTCCCagccaga AGGGACUU m6b Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-499a-5p catgAGTCTTAgccaga UUAAGACU m7b Created HPRT3_3537_G4617.1_81065974
hsa-miR-5589-5p catgagtCCCAGCCaga GGCUGGGU m7a Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-5787 catgagtCCCAGCCaga GGGCUGGG m7b Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-8052 catgAGTCCCagccaga CGGGACUG m6b Disrupted HPRT3_3537_G4617.1_81065974
hsa-miR-8087 catgAGTCTTagccaga GAAGACUU m6b Created HPRT3_3537_G4617.1_81065974
hsa-miR-3199 catgAGTCCCagccaga AGGGACUG m6b Disrupted HPRT3_3537_G4617.1_81065974

Mutation Mutation ID Sample Name Cancer Type
chr10:g.79305211C>A COSM4016227 TCGA-HU-A4GY-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6834-3p gaGGGACATggaggt UAUGUCCC m7b (m6b->m7b) HHFKP_20611_cluster-2559_32_28

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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