SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005431
Gene Symbol: XRCC2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.152649123G>A COSM1087679 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-3p tACTGCAGTagtagc ACUGCAGU m8a (m8a->m7a) HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-25-3p tacTGCAATagtagc CAUUGCAC m6b Created HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-363-3p tacTGCAATagtagc AAUUGCAC m6b Created HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-367-3p tacTGCAATagtagc AAUUGCAC m6b Created HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-4418 taCTGCAGTagtagc CACUGCAG m7b (m7b->m6b) HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-509-3-5p taCTGCAGTAgtagc UACUGCAG m8a Disrupted HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-509-5p taCTGCAGTAgtagc UACUGCAG m8a Disrupted HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-6807-3p tacTGCAGTagtagc CACUGCAU m6b Disrupted HHKTA_5218_NM_005431|447|486|12.115023494492|0.17136240751587
hsa-miR-17-3p tACTGCAGTagtagc ACUGCAGU m8a (m8a->m7a) HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-25-3p tacTGCAATagtagc CAUUGCAC m6b Created HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-363-3p tacTGCAATagtagc AAUUGCAC m6b Created HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-367-3p tacTGCAATagtagc AAUUGCAC m6b Created HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-4418 taCTGCAGTagtagc CACUGCAG m7b (m7b->m6b) HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-509-3-5p taCTGCAGTAgtagc UACUGCAG m8a Disrupted HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-509-5p taCTGCAGTAgtagc UACUGCAG m8a Disrupted HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587
hsa-miR-6807-3p tacTGCAGTagtagc CACUGCAU m6b Disrupted HHKTB_1398_NM_005431|447|486|53.4555490174953|0.17136240751587

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152649033T>C COSM95546 111677 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3660 gatagcCTGTCAGct ACUGACAG m7b Disrupted HHFCT_145167_uc003wld.1_2_8
hsa-miR-4438 gatAGCCTGTcagct CACAGGCU m7b Disrupted HHFCT_145167_uc003wld.1_2_8
hsa-miR-4526 gatagcCTGTCAGCt GCUGACAG m8a Disrupted HHFCT_145167_uc003wld.1_2_8

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152649008C>T COSM1087678 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4462 tagaCCGTGTCAatg UGACACGG m8a Created HPRO6_73203_G87430.1_152346098
hsa-miR-514a-3p tagaccGTGTCAATg AUUGACAC m8a Created HPRO6_73203_G87430.1_152346098
hsa-miR-514b-3p tagaccGTGTCAATg AUUGACAC m8a Created HPRO6_73203_G87430.1_152346098
hsa-miR-602 tagaCCGTGTCaatg GACACGGG m7a Created HPRO6_73203_G87430.1_152346098

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152649004A>G COSM206355 TCGA-AA-3977-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p ccgcgtcAATGGAGg ACUCCAUU m7b Disrupted HPRO6_73203_G87430.1_152346098
hsa-miR-181a-3p ccgcgTCGATGGagg ACCAUCGA m7b Created HPRO6_73203_G87430.1_152346098

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152649003A>G COSM4987289 RMS110_ [soft_tissue][striated_muscle][rhabdomyosarcoma][alveolar]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p cgcgtCAGTGGagga ACCACUGC m6b Created HPRO6_73203_G87430.1_152346098
hsa-miR-136-5p cgcgtcAATGGAGga ACUCCAUU m7b Disrupted HPRO6_73203_G87430.1_152346098
hsa-miR-181a-2-3p cgcgTCAGTGGagga ACCACUGA m7b Created HPRO6_73203_G87430.1_152346098
hsa-miR-6509-3p cgcgtCAGTGGAgga UUCCACUG m7b Created HPRO6_73203_G87430.1_152346098

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152648718T>G COSM1232985 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3129-3p tcATTAGTTTcacgt AAACUAAU m8a Disrupted HHKTA_8250_NM_005431|820|859|7.87476527141979|0.17136240751587
hsa-miR-5583-5p tcATTAGTTTcacgt AAACUAAU m8a Disrupted HHKTA_8250_NM_005431|820|859|7.87476527141979|0.17136240751587

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152648712G>A COSM206351 TCGA-AA-3525-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8066 gttTCACATTGttta CAAUGUGA m8a Created HHKTA_8250_NM_005431|820|859|7.87476527141979|0.17136240751587

Mutation Mutation ID Sample Name Cancer Type
chr7:g.152648650T>A COSM4973563 1N26-VS-1T26 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3606-3p ggttGAAATTTgttg AAAAUUUC m7b Created HHFCT_145166_uc003wld.1_1_66
hsa-miR-4272 gGTTGAATtttgttg CAUUCAAC m7b Disrupted HHFCT_145166_uc003wld.1_1_66
hsa-miR-513a-3p ggttGAAATTTgttg UAAAUUUC m7b Created HHFCT_145166_uc003wld.1_1_66
hsa-miR-513c-3p ggttGAAATTTgttg UAAAUUUC m7b Created HHFCT_145166_uc003wld.1_1_66
hsa-miR-7-1-3p ggttgaaATTTGTTg CAACAAAU m7b Created HHFCT_145166_uc003wld.1_1_66
hsa-miR-7-2-3p ggttgaaATTTGTTg CAACAAAU m7b Created HHFCT_145166_uc003wld.1_1_66

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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