SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029673
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20800299C>T COSM1365779 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-519d-5p cagcgTTTGGAGcag CCUCCAAA m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-519d-5p cagcgTTTGGAGcag CCUCCAAA m7b Created HPRO6_22963_G26889.1_21374422

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20800288C>A COSM945914 TCGA-D1-A16N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-5p gcagataCAGAGGGt GCCCUCUG m7b Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-2276-5p gcagataCAGAGGGt GCCCUCUG m7b Disrupted HPRO6_22963_G26889.1_21374422

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20800282G>A COSM3793182 TCGA-FJ-A3ZE-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-3p acagaggATTCTCAg UUGAGAAU m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-589-5p acagagGGTTCTCAg UGAGAACC m8a Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-580-3p acagaggATTCTCAg UUGAGAAU m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-589-5p acagagGGTTCTCAg UGAGAACC m8a Disrupted HPRO6_22963_G26889.1_21374422
hsa-miR-580-3p acagaggATTCTCAg UUGAGAAU m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-589-5p acagagGGTTCTCAg UGAGAACC m8a Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-580-3p acagaggATTCTCAg UUGAGAAU m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-589-5p acagagGGTTCTCAg UGAGAACC m8a Disrupted HPRO6_22963_G26889.1_21374422

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20800280T>G COSM4641803 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3663-3p agagGGTGCTCAgtg UGAGCACC m8a Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-4251 agagggTTCTCAGtg CCUGAGAA m7b Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-589-5p agagGGTTCTCAgtg UGAGAACC m8a Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-6865-3p aGAGGGTGctcagtg ACACCCUC m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-6871-3p agaGGGTGCTcagtg CAGCACCC m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-3663-3p agagGGTGCTCAgtg UGAGCACC m8a Created HPRO6_22963_G26889.1_21374422
hsa-miR-4251 agagggTTCTCAGtg CCUGAGAA m7b Disrupted HPRO6_22963_G26889.1_21374422
hsa-miR-589-5p agagGGTTCTCAgtg UGAGAACC m8a Disrupted HPRO6_22963_G26889.1_21374422
hsa-miR-6865-3p aGAGGGTGctcagtg ACACCCUC m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-6871-3p agaGGGTGCTcagtg CAGCACCC m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-3663-3p agagGGTGCTCAgtg UGAGCACC m8a Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-4251 agagggTTCTCAGtg CCUGAGAA m7b Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-589-5p agagGGTTCTCAgtg UGAGAACC m8a Disrupted HHFCT_39949_uc001unq.2_20_8
hsa-miR-6865-3p aGAGGGTGctcagtg ACACCCUC m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-6871-3p agaGGGTGCTcagtg CAGCACCC m7b Created HHFCT_39949_uc001unq.2_20_8
hsa-miR-3663-3p agagGGTGCTCAgtg UGAGCACC m8a Created HPRO6_22963_G26889.1_21374422
hsa-miR-4251 agagggTTCTCAGtg CCUGAGAA m7b Disrupted HPRO6_22963_G26889.1_21374422
hsa-miR-589-5p agagGGTTCTCAgtg UGAGAACC m8a Disrupted HPRO6_22963_G26889.1_21374422
hsa-miR-6865-3p aGAGGGTGctcagtg ACACCCUC m7b Created HPRO6_22963_G26889.1_21374422
hsa-miR-6871-3p agaGGGTGCTcagtg CAGCACCC m7b Created HPRO6_22963_G26889.1_21374422

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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