SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064422
Gene Symbol: XPC
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.14159812C>T COSM3781097 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3123 gATTCTCTGggctct CAGAGAAU m8a (m7a->m8a) HHFCT_102880_cluster-16407_7_14
hsa-miR-3919 gaTTCTCTGggctct GCAGAGAA m7b (m6b->m7b) HHFCT_102880_cluster-16407_7_14
hsa-miR-3940-3p gattctCCGGGCTct CAGCCCGG m7b Disrupted HHFCT_102880_cluster-16407_7_14
hsa-miR-3123 gATTCTCTGggctct CAGAGAAU m8a (m7a->m8a) HHFKP_95685_cluster-16407_6_151
hsa-miR-3919 gaTTCTCTGggctct GCAGAGAA m7b (m6b->m7b) HHFKP_95685_cluster-16407_6_151
hsa-miR-3940-3p gattctCCGGGCTct CAGCCCGG m7b Disrupted HHFKP_95685_cluster-16407_6_151

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14159776C>A COSM4608988 2293782 [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4999-5p attgtctATACAGCc UGCUGUAU m7b Created HHFCT_102880_cluster-16407_7_14
hsa-miR-6832-5p attgTCTCTACagcc AGUAGAGA m7b Disrupted HHFCT_102880_cluster-16407_7_14
hsa-miR-4999-5p attgtctATACAGCc UGCUGUAU m7b Created HHFKP_95685_cluster-16407_6_151
hsa-miR-6832-5p attgTCTCTACagcc AGUAGAGA m7b Disrupted HHFKP_95685_cluster-16407_6_151

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14158887G>T COSM1419511 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-3p agGGAAAGaaacctt ACUUUCCU m6b Disrupted HHFCT_102879_cluster-16407_6_7

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14158800G>A COSM3124963 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p aaccaaAAACCAGCa GCUGGUUU m8a Created HHKTB_3665_NM_004628|1182|1221|31.493191669222|0.583662020082963
hsa-miR-3663-5p aaccaaAGACCAGCa GCUGGUCU m8a Disrupted HHKTB_3665_NM_004628|1182|1221|31.493191669222|0.583662020082963
hsa-miR-6131 aaccaaaGACCAGCa GGCUGGUC m7b Disrupted HHKTB_3665_NM_004628|1182|1221|31.493191669222|0.583662020082963
hsa-miR-9-5p aACCAAAGAccagca UCUUUGGU m8a (m8a->m7a) HHKTB_3665_NM_004628|1182|1221|31.493191669222|0.583662020082963

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14158522A>C COSM3846405 TCGA-AN-A0AK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p gCCTCTGCTccctct AGCAGAGG m8a (m7a->m8a) HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-383-5p gccTCTGATCcctct AGAUCAGA m7b Disrupted HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4419a gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4468 gccTCTGCTCcctct AGAGCAGA m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4510 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6081 gcctCTGCTCCctct AGGAGCAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6127 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6129 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6130 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6133 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-2467-3p gCCTCTGCTccctct AGCAGAGG m8a (m7a->m8a) HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-383-5p gccTCTGATCcctct AGAUCAGA m7b Disrupted HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4419a gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4468 gccTCTGCTCcctct AGAGCAGA m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-4510 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6081 gcctCTGCTCCctct AGGAGCAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6127 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6129 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6130 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6133 gcctctgCTCCCTCt UGAGGGAG m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14158520C>T COSM3588240 TCGA-EE-A2GR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3125 ctctgaTTCCTCTga UAGAGGAA m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-3916 ctctgaTTCCTCTga AAGAGGAA m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6847-5p ctctgatTCCTCTGa ACAGAGGA m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6859-5p ctctgaTTCCTCTga GAGAGGAA m7b Created HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6873-5p ctctgaTCCCTCTGa CAGAGGGA m8a Disrupted HHHNA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-3125 ctctgaTTCCTCTga UAGAGGAA m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-3916 ctctgaTTCCTCTga AAGAGGAA m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6847-5p ctctgatTCCTCTGa ACAGAGGA m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6859-5p ctctgaTTCCTCTga GAGAGGAA m7b Created HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338
hsa-miR-6873-5p ctctgaTCCCTCTGa CAGAGGGA m8a Disrupted HHHSA_16069_XPC|NM_001145769|exon_CDS|-5.97190366392159|-0.0610165390565338

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14156446A>G COSM242674 PR-3035 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p ggctTATATAagaac CUAUAUAU m6b Disrupted HHFKP_95683_cluster-16407_4_8
hsa-miR-410-3p ggcTTATATaagaac AAUAUAAC m6b Disrupted HHFKP_95683_cluster-16407_4_8
hsa-miR-600 ggcttaTGTAAGaac ACUUACAG m6b Created HHFKP_95683_cluster-16407_4_8
hsa-miR-6083 ggcttATATAAGaac CUUAUAUC m7a Disrupted HHFKP_95683_cluster-16407_4_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.14156437A>C COSM3846404 TCGA-A8-A0A6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1293 aagaACCACCCtctg UGGGUGGU m7b Disrupted HHFKP_95683_cluster-16407_4_8
hsa-miR-203a-5p aaGAACCACcctctg AGUGGUUC m7b (m7b->m6b) HHFKP_95683_cluster-16407_4_8
hsa-miR-4483 aagaACCACCCtctg GGGGUGGU m7b Disrupted HHFKP_95683_cluster-16407_4_8
hsa-miR-6804-5p aagaacCACCCTCtg UGAGGGUG m7b Disrupted HHFKP_95683_cluster-16407_4_8
hsa-miR-876-3p aagAACCACCctctg UGGUGGUU m7b Disrupted HHFKP_95683_cluster-16407_4_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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