SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015253
Gene Symbol: WSCD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.6123068G>C COSN7441991 8031121 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8058 caggaAAGTCCAttt CUGGACUU m7b Disrupted HHKTA_29577_NM_015253|4460|4499|2.50954058100191|0.275850802419226
hsa-miR-6514-5p caggaaACTCCATtt UAUGGAGU m7b Created HHKTA_29577_NM_015253|4460|4499|2.50954058100191|0.275850802419226
hsa-miR-5009-5p caggaAAGTCCAttt UUGGACUU m7b Disrupted HHKTA_29577_NM_015253|4460|4499|2.50954058100191|0.275850802419226
hsa-miR-3124-3p cAGGAAAGTccattt ACUUUCCU m8a (m8a->m7a) HHKTA_29577_NM_015253|4460|4499|2.50954058100191|0.275850802419226

Mutation Mutation ID Sample Name Cancer Type
chr17:g.6110830T>C COSM982393 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-182-5p ggctTTGCCAAgctt UUUGGCAA m7b Created HHHSE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4453 ggctttgCCAAGCTt GAGCUUGG m7b Created HHHSE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4470 ggcTTTGCCAagctt UGGCAAAC m7a Created HHHSE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4538 ggctttgCCAAGCTt GAGCUUGG m7b Created HHHSE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4453 ggctttgCCAAGCTt GAGCUUGG m7b Created HHHNE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-182-5p ggctTTGCCAAgctt UUUGGCAA m7b Created HHHNE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4470 ggcTTTGCCAagctt UGGCAAAC m7a Created HHHNE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072
hsa-miR-4538 ggctttgCCAAGCTt GAGCUUGG m7b Created HHHNE_20932_WSCD1|NM_015253|exon_CDS|-5.53818605648915|1.46976864027072

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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