SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0042498
Gene Symbol: WSB1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.27306872C>G COSM336071 LUAD-B02515 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-149-5p gtcgGAGCCAGtaaa UCUGGCUC m7b Disrupted HHRBC_5408_BC3-2of3-SCL_7594
hsa-miR-193a-3p gtcggaGCCAGTaaa AACUGGCC m6b Disrupted HHRBC_5408_BC3-2of3-SCL_7594
hsa-miR-193b-3p gtcggaGCCAGTaaa AACUGGCC m6b Disrupted HHRBC_5408_BC3-2of3-SCL_7594
hsa-miR-664a-5p gtcggAGCCAGTaaa ACUGGCUA m7a Disrupted HHRBC_5408_BC3-2of3-SCL_7594
hsa-miR-6836-3p gtcGGAGGCAgtaaa AUGCCUCC m7b Created HHRBC_5408_BC3-2of3-SCL_7594
hsa-miR-892b gtcggAGCCAGTaaa CACUGGCU m7b Disrupted HHRBC_5408_BC3-2of3-SCL_7594

Mutation Mutation ID Sample Name Cancer Type
chr17:g.27306802AG>A COSM2799340 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4313 agtattgAGGGGGCat AGCCCCCU m7b Disrupted HHHNE_20925_WSB1|NM_134265|exon_CDS|-6.61344677606992|-1.13810425300214
hsa-miR-4749-3p agtattGAGGGGCat CGCCCCUC m7b Created HHHNE_20925_WSB1|NM_134265|exon_CDS|-6.61344677606992|-1.13810425300214
hsa-miR-4313 agtattgAGGGGGCat AGCCCCCU m7b Disrupted HHHSE_20925_WSB1|NM_134265|exon_CDS|-6.61344677606992|-1.13810425300214
hsa-miR-4749-3p agtattGAGGGGCat CGCCCCUC m7b Created HHHSE_20925_WSB1|NM_134265|exon_CDS|-6.61344677606992|-1.13810425300214

Mutation Mutation ID Sample Name Cancer Type
chr17:g.27304886C>T COSM4501313 CSCC-57-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3664-5p aaactctCAGAGTat AACUCUGU m6b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-3921 aaactCTCAGAGtat UCUCUGAG m7b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4251 aaacTCTCAGagtat CCUGAGAA m6b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4329 aaacTCTCAGagtat CCUGAGAC m6b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4653-5p aaactCTCAGAGtat UCUCUGAG m7b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4714-5p aaactcTCAGAGTat AACUCUGA m7b Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-5684 aaactctTAGAGTat AACUCUAG m6b Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-6761-5p aaaCTCTCAGAgtat UCUGAGAG m8a Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075

Mutation Mutation ID Sample Name Cancer Type
chr17:g.27304873G>C COSM4817910 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 gcttcaaCAGACAaa GUGUCUGG m6b Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-1267 gctTCAACAGacaaa CCUGUUGA m7b Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-367-5p gcttCAACAGacaaa ACUGUUGC m6b Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4288 gcttcaaCAGACAAa UUGUCUGC m7a Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-4635 gCTTCAAGAgacaaa UCUUGAAG m8a (m8a->m7a) HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-526b-5p gctTCAAGAGacaaa CUCUUGAG m7a Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-593-3p gcttcaAGAGACAaa UGUCUCUG m7a Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-632 gcttcaaCAGACAaa GUGUCUGC m6b Created HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-653-5p gcTTCAACAgacaaa GUGUUGAA m7b (m6b->m7b) HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-6818-3p gcttcaAGAGACAAa UUGUCUCU m8a Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075
hsa-miR-6895-3p gcttcaAGAGACAaa UGUCUCUC m7a Disrupted HHKTA_20119_NM_015626|880|919|3.6345070483476|0.898729291797075

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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