SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001143991
Gene Symbol: WRAP53
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.7703484TA>T COSM1386965 TCGA-CK-6746-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6083 gctGATATAAaaaggt CUUAUAUC m7b Disrupted HHKTA_44492_NM_018081|1922|1961|1.64418175996677|1.12769563802888

Mutation Mutation ID Sample Name Cancer Type
chr17:g.7703466G>T COSM344606 LUAD-S01315 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-3p ggagggAGGTGTGgg UCACACCU m7b Disrupted HHKTA_44492_NM_018081|1922|1961|1.64418175996677|1.12769563802888
hsa-miR-1306-5p ggagGGAGGTGtggg CCACCUCC m7b Disrupted HHKTA_44492_NM_018081|1922|1961|1.64418175996677|1.12769563802888
hsa-miR-4469 gGAGGGAGgtgtggg GCUCCCUC m7b Disrupted HHKTA_44492_NM_018081|1922|1961|1.64418175996677|1.12769563802888

Mutation Mutation ID Sample Name Cancer Type
chr17:g.7701523G>A COSM985002 TCGA-AX-A060-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3940-3p gctCCGGGCTtcctt CAGCCCGG m7b Disrupted HPTA3_7671_G12133.1_7604835
hsa-miR-671-5p gctccgGGCTTCCTt AGGAAGCC m8a Disrupted HPTA3_7671_G12133.1_7604835

Mutation Mutation ID Sample Name Cancer Type
chr17:g.7701502G>A COSM2745343 LIM1215 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3657 ctGGGACACAttcac UGUGUCCC m8a Created HPTA3_7671_G12133.1_7604835

Mutation Mutation ID Sample Name Cancer Type
chr17:g.7700794T>A COSM4838093 TCGA-EA-A411-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3123 gctggtATTCTCTGa CAGAGAAU m8a Disrupted HPRO6_31437_G37272.1_7604106
hsa-miR-3919 gctggtaTTCTCTGa GCAGAGAA m7b Disrupted HPRO6_31437_G37272.1_7604106
hsa-miR-4756-3p gctggtaATCTCTGa CCAGAGAU m7b Created HPRO6_31437_G37272.1_7604106
Mutation Mutation ID Sample Name Cancer Type
chr17:g.7689688A>AA COSM4424767 217 [oesophagus][middle_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.7689677G>T COSM4139894 AOCS-167-16-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1178-3p atgaggGTGAGCAgg UUGCUCAC m7b Created HHFCT_65790_cluster-9347_1_6
hsa-miR-6784-3p atgaGGGTGAGcagg UCUCACCC m7b Created HHFCT_65790_cluster-9347_1_6
hsa-miR-6862-3p atgaGGGTGAGcagg CCUCACCC m7b Created HHFCT_65790_cluster-9347_1_6
hsa-miR-6865-3p atGAGGGTGagcagg ACACCCUC m7b (m6b->m7b) HHFCT_65790_cluster-9347_1_6
hsa-miR-7106-3p atgaggGGGAGCagg AGCUCCCU m6b Disrupted HHFCT_65790_cluster-9347_1_6
hsa-miR-767-3p atgagggTGAGCAGg UCUGCUCA m7b Created HHFCT_65790_cluster-9347_1_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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