SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_144992
Gene Symbol: VWA3B
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.98207152C>A COSN8610427 4095_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 accCTGGACactgac GGUCCAGA m6b Created HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-194-3p accctggCCACTGac CCAGUGGG m6b Disrupted HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-6733-3p accctgGACACTGAc UCAGUGUC m8a Created HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-5693 accctgGCCACTGac GCAGUGGC m7b Disrupted HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-6733-3p accctgGACACTGAc UCAGUGUC m8a Created HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-5693 accctgGCCACTGac GCAGUGGC m7b Disrupted HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-4435 accCTGGCCActgac AUGGCCAG m7b Disrupted HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-4302 accctggACACTGac CCAGUGUG m6b Created HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-3677-5p accctGGCCACTGac CAGUGGCC m8a Disrupted HHRBL_8406_BCBL1-2of3-SCL_13164
hsa-miR-4435 accCTGGCCActgac AUGGCCAG m7b Disrupted HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-194-3p accctggCCACTGac CCAGUGGG m6b Disrupted HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-198 accCTGGACactgac GGUCCAGA m6b Created HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-3677-5p accctGGCCACTGac CAGUGGCC m8a Disrupted HHRBC_7348_BC3-2of3-SCL_6738
hsa-miR-4302 accctggACACTGac CCAGUGUG m6b Created HHRBC_7348_BC3-2of3-SCL_6738

Mutation Mutation ID Sample Name Cancer Type
chr2:g.98206452A>C COSN1863323 RK098_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4505 aCCCAGCCTttgggt AGGCUGGG m8a (m7a->m8a) HHFCT_89262_cluster-13023_1_26
hsa-miR-186-3p acccagcCTTTGGGt GCCCAAAG m7b Created HHFCT_89262_cluster-13023_1_26
hsa-miR-105-5p acccaGCATTTGggt UCAAAUGC m7b Disrupted HHFCT_89262_cluster-13023_1_26
hsa-miR-7853-5p acccaGCATTTGggt UCAAAUGC m7b Disrupted HHFCT_89262_cluster-13023_1_26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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