SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0033142 |
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Gene Symbol: | VRK1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr14:g.96872371C>T | COSN8159996 | ASHPC_0011_Pa_P | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-128-3p | tgcaaaaCACTGTGc | UCACAGUG | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
hsa-miR-144-3p | tgcaaaATACTGTgc | UACAGUAU | m7b | Created | HPKTA_19044_G20563.1_97338707 |
hsa-miR-16-1-3p | tgcaaAATACTGtgc | CCAGUAUU | m7b | Created | HPKTA_19044_G20563.1_97338707 |
hsa-miR-19a-5p | tGCAAAACactgtgc | AGUUUUGC | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
hsa-miR-19b-1-5p | tGCAAAACactgtgc | AGUUUUGC | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
hsa-miR-19b-2-5p | tGCAAAACactgtgc | AGUUUUGC | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
hsa-miR-216a-3p | tgcaaaaCACTGTGc | UCACAGUG | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
hsa-miR-3681-3p | tgcaaaaCACTGTGc | ACACAGUG | m7b | Disrupted | HPKTA_19044_G20563.1_97338707 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr14:g.96860690C>A | COSM165520 | PD4601a | [NS][NS][NS][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-141-3p | tggacctCAGTGTTg | UAACACUG | m7b | Disrupted | HHHNH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
hsa-miR-200a-3p | tggacctCAGTGTTg | UAACACUG | m7b | Disrupted | HHHNH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
hsa-miR-7162-3p | tggACCTCAGtgttg | UCUGAGGU | m7b | Disrupted | HHHNH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
hsa-miR-141-3p | tggacctCAGTGTTg | UAACACUG | m7b | Disrupted | HHHSH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
hsa-miR-200a-3p | tggacctCAGTGTTg | UAACACUG | m7b | Disrupted | HHHSH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
hsa-miR-7162-3p | tggACCTCAGtgttg | UCUGAGGU | m7b | Disrupted | HHHSH_4195_VRK1|NM_003384|exon_CDS|-7.30585360485434|-1.32628799924547 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr14:g.96860604G>A | COSM3968991 | TCGA-FG-6692-01 | [central_nervous_system][brain][glioma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-30a-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-30d-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-30e-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-3591-5p | ctACACTAAAaaacc | UUUAGUGU | m8a | Created | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-4276 | ctaCACTGAaaaacc | CUCAGUGA | m6b | Disrupted | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-4302 | ctACACTGaaaaacc | CCAGUGUG | m6b | Disrupted | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-6733-3p | ctACACTGAaaaacc | UCAGUGUC | m7a | (m7a->m6a) | HHFCT_48812_uc001yft.1_17_8 |
hsa-miR-30a-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HPSEF_7144_G8592.1_97326956 |
hsa-miR-30d-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HPSEF_7144_G8592.1_97326956 |
hsa-miR-30e-3p | ctacACTGAAAaacc | CUUUCAGU | m7b | Disrupted | HPSEF_7144_G8592.1_97326956 |
hsa-miR-3591-5p | ctACACTAAAaaacc | UUUAGUGU | m8a | Created | HPSEF_7144_G8592.1_97326956 |
hsa-miR-4276 | ctaCACTGAaaaacc | CUCAGUGA | m6b | Disrupted | HPSEF_7144_G8592.1_97326956 |
hsa-miR-4302 | ctACACTGaaaaacc | CCAGUGUG | m6b | Disrupted | HPSEF_7144_G8592.1_97326956 |
hsa-miR-6733-3p | ctACACTGAaaaacc | UCAGUGUC | m7a | (m7a->m6a) | HPSEF_7144_G8592.1_97326956 |