SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0033137
Gene Symbol: VRK1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855270G>T COSM1516513 TCGA-78-7159-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p cCAGAAGGAgttcat UCCUUCUG m8a (m8a->m7a) HHFCT_48810_uc001yft.1_15_12
hsa-miR-138-1-3p ccaGAAGTAGttcat GCUACUUC m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-3682-5p ccAGAAGTAGttcat CUACUUCU m8a Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-4680-5p ccagaagGAGTTCat AGAACUCU m6b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-606 ccagaAGTAGTTcat AAACUACU m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-6868-3p ccAGAAGGAgttcat UUCCUUCU m7b (m7b->m6b) HHFCT_48810_uc001yft.1_15_12
hsa-miR-7158-3p ccagaagTAGTTCAt CUGAACUA m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855261G>A COSM959437 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1229-5p cggtaCTACCCAgaa GUGGGUAG m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-1285-3p cggtacTGCCCAGAa UCUGGGCA m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-197-5p cggtaCTACCCagaa CGGGUAGA m6b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-3187-5p cggtacTGCCCAGaa CCUGGGCA m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-378g cggtactGCCCAGaa ACUGGGCU m6b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-4486 cggtactGCCCAGaa GCUGGGCG m6b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-5189-5p cggtacTGCCCAGAa UCUGGGCA m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-612 cggtacTGCCCAGaa GCUGGGCA m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-6776-5p cggtactACCCAGAa UCUGGGUG m7a Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-6860 cggtacTGCCCAGaa ACUGGGCA m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-6861-5p cggtacTACCCAGaa ACUGGGUA m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855255G>A COSM959435 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1278 gcttatCAGTACTgc UAGUACUG m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-3161 gCTTATCAGtactgc CUGAUAAG m8a (m7a->m8a) HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855254C>T COSM4740595 T1184 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-624-5p tgcttatTGGTACTg UAGUACCA m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855251T>A COSM4571970 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-451b cCTTGCTAatcggta UAGCAAGA m7a Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-4766-3p ccTTGCTAatcggta AUAGCAAU m6b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855245C>A COSM4501793 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-3p ttATGGCCTtgctta CAGGCCAU m7b (m7b->m6b) HHFCT_48810_uc001yft.1_15_12
hsa-miR-3908 ttatggCATTGCTta GAGCAAUG m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-3922-5p ttatGGCCTTGctta UCAAGGCC m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-3942-5p ttatggcATTGCTTa AAGCAAUA m7a Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-4708-3p ttatgGCCTTGCTta AGCAAGGC m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-4753-5p ttaTGGCCTTGctta CAAGGCCA m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-5590-5p tTATGGCAttgctta UUGCCAUA m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855244C>T COSM4641902 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-3p attATGGCCTtgctt CAGGCCAU m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-3922-5p attatGGCCTTGctt UCAAGGCC m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-451b attatggTCTTGCTt UAGCAAGA m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-4696 attatgGTCTTGCtt UGCAAGAC m7b Created HHFCT_48810_uc001yft.1_15_12
hsa-miR-4708-3p attatgGCCTTGCTt AGCAAGGC m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-4753-5p attaTGGCCTTGctt CAAGGCCA m8a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-6502-3p attATGGTCTtgctt UAGACCAU m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855240A>G COSM3968990 TCGA-DB-5280-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-3p gtagattATGGCCTt CAGGCCAU m7b Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-4717-5p gtagattGTGGCCTt UAGGCCAC m7b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96855230T>A COSM3987862 TCGA-A4-7584-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p ggtgtACTTGGTaga ACCAAGUC m7a Disrupted HHFCT_48810_uc001yft.1_15_12
hsa-miR-7153-3p ggtgtaCATGGTaga CACCAUGG m6b Created HHFCT_48810_uc001yft.1_15_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96852907C>T COSM3499618 TCGA-EB-A3Y6-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser