SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0033134
Gene Symbol: VRK1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr14:g.96846150C>A COSM4740594 T2969 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-3p cgAGCTGCAAaacca UUGCAGCU m8a Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-19a-5p cgagctGCAAAACca AGUUUUGC m7b Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-19b-1-5p cgagctGCAAAACca AGUUUUGC m7b Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-19b-2-5p cgagctGCAAAACca AGUUUUGC m7b Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-30a-3p cgagCTGAAAaacca CUUUCAGU m6b Created HHFKP_46568_uc001yft.1_13_173
hsa-miR-30d-3p cgagCTGAAAaacca CUUUCAGU m6b Created HHFKP_46568_uc001yft.1_13_173
hsa-miR-30e-3p cgagCTGAAAaacca CUUUCAGU m6b Created HHFKP_46568_uc001yft.1_13_173
hsa-miR-4660 cGAGCTGCAaaacca UGCAGCUC m8a (m8a->m7a) HHFKP_46568_uc001yft.1_13_173
hsa-miR-5047 cgAGCTGCAAaacca UUGCAGCU m8a Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-557 cgagcTGCAAAacca GUUUGCAC m6b Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-6516-5p cgagCTGCAAAacca UUUGCAGU m7a Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-6736-3p cGAGCTGAaaaacca UCAGCUCC m7a Created HHFKP_46568_uc001yft.1_13_173
hsa-miR-7156-3p cgaGCTGCAaaacca CUGCAGCC m6b Disrupted HHFKP_46568_uc001yft.1_13_173

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96846141A>T COSM699678 TCGA-34-5239-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-3p ttctaCCAACGagct ACGUUGGC m6b Disrupted HHFKP_46568_uc001yft.1_13_173
hsa-miR-3529-5p tTCTACCTacgagct AGGUAGAC m7a Created HHFKP_46568_uc001yft.1_13_173
hsa-miR-6831-5p tTCTACCTAcgagct UAGGUAGA m8a (m7a->m8a) HHFKP_46568_uc001yft.1_13_173

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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