SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0033129
Gene Symbol: VRK1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr14:g.96823920A>G COSN1667443 RK032_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-3p ttcatTCATCTGtta UCAGAUGA m7b Disrupted HHFKP_46564_uc001yft.1_9_8
hsa-miR-5683 ttcattCATCTGTta UACAGAUG m7b Disrupted HHFKP_46564_uc001yft.1_9_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96797813G>C COSN6639718 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1203 ggGCTCCGGGtgaac CCCGGAGC m8a Disrupted HHFKP_46557_uc001yft.1_2_12
hsa-miR-181d-3p gggctCCCGGTGaac CCACCGGG m7b Created HHFKP_46557_uc001yft.1_2_12
hsa-miR-4655-5p gggctCCCGGTGaac CACCGGGG m7a Created HHFKP_46557_uc001yft.1_2_12
hsa-miR-6827-5p gGGCTCCCggtgaac UGGGAGCC m7b Created HHFKP_46557_uc001yft.1_2_12
hsa-miR-941 gggctCCGGGTGaac CACCCGGC m7a Disrupted HHFKP_46557_uc001yft.1_2_12

Mutation Mutation ID Sample Name Cancer Type
chr14:g.96797599G>T COSN7034921 8051900 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 tcgcccCGCGGGacc GCCCGCGU m6b Disrupted HHFKP_46556_uc001yft.1_1_8
hsa-miR-3184-5p tcGCCCCTCgggacc UGAGGGGC m7b (m6b->m7b) HHFKP_46556_uc001yft.1_1_8
hsa-miR-423-5p tcGCCCCTCgggacc UGAGGGGC m7b (m6b->m7b) HHFKP_46556_uc001yft.1_1_8
hsa-miR-4740-3p tcgcccCTCGGGacc GCCCGAGA m6b Created HHFKP_46556_uc001yft.1_1_8
hsa-miR-744-5p tcGCCCCGCgggacc UGCGGGGC m7b (m7b->m6b) HHFKP_46556_uc001yft.1_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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