SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0005452
Gene Symbol: VGLL3
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968687A>G COSM3373304 TCGA-FK-A3SB-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-511-5p acatcacAAAGACAg GUGUCUUU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-6844 acatcACAAAGAcag UUCUUUGU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-8070 acATCACAaagacag AUGUGAUU m6b Disrupted HHFCT_105470_uc003dqn.1_12_21

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968681A>G COSM4120434 TCGA-HU-A4H5-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p caaagaCAGAACCaa AGGUUCUG m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-182-3p caaagacAGAACCAa UGGUUCUA m7a Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-218-1-3p caaagacGGAACCAa AUGGUUCC m7b Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-3120-5p caaAGACAGaaccaa CCUGUCUG m6b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-340-3p caaAGACGGAaccaa UCCGUCUC m7a Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-4743-3p caaaGACAGAAccaa UUUCUGUC m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-511-5p cAAAGACAgaaccaa GUGUCUUU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-597-3p caaagacAGAACCAa UGGUUCUC m7a Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-6827-3p caaAGACGGaaccaa ACCGUCUC m6b Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-6888-3p caaAGACAGAaccaa AUCUGUCU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968670C>A COSM4120433 TCGA-HU-A4H5-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 ccaaCTACAGTcacc CACUGUAG m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-134-5p ccaactaCAGTCACc UGUGACUG m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-20b-3p ccaACTACAGTcacc ACUGUAGU m8a Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-3118 ccaactaCAGTCACc UGUGACUG m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-3164 ccaactaAAGTCACc UGUGACUU m7b Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-4703-3p cCAACTACAgtcacc UGUAGUUG m8a (m8a->m7a) HHFCT_105470_uc003dqn.1_12_21
hsa-miR-6820-3p ccaactaAAGTCACc UGUGACUU m7b Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-943 ccaactACAGTCAcc CUGACUGU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-1183 ccaaCTACAGTcacc CACUGUAG m7b Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-134-5p ccaactaCAGTCACc UGUGACUG m7b Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-20b-3p ccaACTACAGTcacc ACUGUAGU m8a Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-3118 ccaactaCAGTCACc UGUGACUG m7b Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-3164 ccaactaAAGTCACc UGUGACUU m7b Created HPRT3_18037_G23991.1_87017817
hsa-miR-4703-3p cCAACTACAgtcacc UGUAGUUG m8a (m8a->m7a) HPRT3_18037_G23991.1_87017817
hsa-miR-6820-3p ccaactaAAGTCACc UGUGACUU m7b Created HPRT3_18037_G23991.1_87017817
hsa-miR-943 ccaactACAGTCAcc CUGACUGU m7b Disrupted HPRT3_18037_G23991.1_87017817

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968663C>T COSM584843 TCGA-50-5941-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p cagtcaCCTCTGCTa AGCAGAGG m8a Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-298 cagtcaCTTCTGCTa AGCAGAAG m8a Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-4257 cagtcACCTCTGcta CCAGAGGU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-7854-3p cagTCACCTCtgcta UGAGGUGA m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-2467-3p cagtcaCCTCTGCTa AGCAGAGG m8a Disrupted HPRO6_55446_G65950.1_87017810
hsa-miR-298 cagtcaCTTCTGCTa AGCAGAAG m8a Created HPRO6_55446_G65950.1_87017810
hsa-miR-4257 cagtcACCTCTGcta CCAGAGGU m7b Disrupted HPRO6_55446_G65950.1_87017810
hsa-miR-7854-3p cagTCACCTCtgcta UGAGGUGA m7b Disrupted HPRO6_55446_G65950.1_87017810
hsa-miR-2467-3p cagtcaCCTCTGCTa AGCAGAGG m8a Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-298 cagtcaCTTCTGCTa AGCAGAAG m8a Created HPRT3_18037_G23991.1_87017817
hsa-miR-4257 cagtcACCTCTGcta CCAGAGGU m7b Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-7854-3p cagTCACCTCtgcta UGAGGUGA m7b Disrupted HPRT3_18037_G23991.1_87017817

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968659G>C COSM1328041 TCGA-29-1784-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p caCCTCTGCTacctc AGCAGAGG m8a Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-4257 cACCTCTGctacctc CCAGAGGU m7b Disrupted HHFCT_105470_uc003dqn.1_12_21
hsa-miR-5192 cacCTCTCCTacctc AGGAGAGU m7a Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-6888-5p caccTCTCCTacctc AAGGAGAU m6b Created HHFCT_105470_uc003dqn.1_12_21
hsa-miR-2467-3p caCCTCTGCTacctc AGCAGAGG m8a Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-4257 cACCTCTGctacctc CCAGAGGU m7b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-5192 cacCTCTCCTacctc AGGAGAGU m7a Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6888-5p caccTCTCCTacctc AAGGAGAU m6b Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-2467-3p caCCTCTGCTacctc AGCAGAGG m8a Disrupted HPRO6_55446_G65950.1_87017810
hsa-miR-4257 cACCTCTGctacctc CCAGAGGU m7b Disrupted HPRO6_55446_G65950.1_87017810
hsa-miR-5192 cacCTCTCCTacctc AGGAGAGU m7a Created HPRO6_55446_G65950.1_87017810
hsa-miR-6888-5p caccTCTCCTacctc AAGGAGAU m6b Created HPRO6_55446_G65950.1_87017810
hsa-miR-2467-3p caCCTCTGCTacctc AGCAGAGG m8a Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-4257 cACCTCTGctacctc CCAGAGGU m7b Disrupted HPRT3_18037_G23991.1_87017817
hsa-miR-5192 cacCTCTCCTacctc AGGAGAGU m7a Created HPRT3_18037_G23991.1_87017817
hsa-miR-6888-5p caccTCTCCTacctc AAGGAGAU m6b Created HPRT3_18037_G23991.1_87017817

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968641G>A COSM4120432 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-5p atggGCTAGAGcctt ACUCUAGC m7b Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-1287-3p atgGGCTAGAGcctt CUCUAGCC m8a Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-1301-5p atgggCTAGAGCctt CGCUCUAG m7b Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-5685 aTGGGCTGgagcctt ACAGCCCA m7b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6502-5p atgggCTAGAGCctt AGCUCUAG m7b Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6512-3p atgGGCTGGAgcctt UUCCAGCC m7b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6720-5p atgGGCTGGAgcctt UUCCAGCC m7b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6822-3p atgggcTAGAGCCTt AGGCUCUA m8a Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-6849-3p atgGGCTGGagcctt ACCAGCCU m6b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-766-3p atggGCTGGAGcctt ACUCCAGC m7b Disrupted HHFKP_97695_uc003dqn.1_16_34

Mutation Mutation ID Sample Name Cancer Type
chr3:g.86968625C>G COSM375760 LUAD-NYU669 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p catGGAAGAGtagac CCUCUUCC m7b Created HHFKP_97695_uc003dqn.1_16_34
hsa-miR-452-5p catggAACAGTagac AACUGUUU m6b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-4676-3p catggAACAGTagac CACUGUUU m6b Disrupted HHFKP_97695_uc003dqn.1_16_34
hsa-miR-892c-3p catggAACAGTagac CACUGUUU m6b Disrupted HHFKP_97695_uc003dqn.1_16_34
Mutation Mutation ID Sample Name Cancer Type
chr3:g.86947012T>G COSN512116
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.86946999T>G COSN512115
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-3p agttaaGGTGCAGCa GCUGCACC m8a Created HHFCT_105469_uc003dqn.1_11_24
hsa-miR-4772-3p agttaaGTTGCAGca CCUGCAAC m7b Disrupted HHFCT_105469_uc003dqn.1_11_24
hsa-miR-500a-3p agttaAGGTGCAgca AUGCACCU m7b Created HHFCT_105469_uc003dqn.1_11_24
hsa-miR-6804-3p agttaAGGTGCagca CGCACCUG m6b Created HHFCT_105469_uc003dqn.1_11_24
hsa-miR-891b agttAAGTTGCAgca UGCAACUU m8a Disrupted HHFCT_105469_uc003dqn.1_11_24

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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