SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0076608
Gene Symbol: VEGFA
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.43771295T>G COSM3784693 8067246 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7b-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7c-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7d-5p gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7e-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7f-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7g-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7i-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-3927-3p gctgcTCTACCTcca CAGGUAGA m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4451 gctgCTCTACCtcca UGGUAGAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4458 gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4468 gCTGCTCTacctcca AGAGCAGA m7a Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4500 gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4732-5p gctGCTCTACctcca UGUAGAGC m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-6831-5p gctgcTCTACCTcca UAGGUAGA m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-98-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7a-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7b-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7c-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7d-5p gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7e-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7f-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7g-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7i-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-2278 gCTGCTCTacctcca GAGAGCAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-3927-3p gctgcTCTACCTcca CAGGUAGA m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4451 gctgCTCTACCtcca UGGUAGAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4458 gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4468 gCTGCTCTacctcca AGAGCAGA m7a Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4500 gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4732-5p gctGCTCTACctcca UGUAGAGC m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-6831-5p gctgcTCTACCTcca UAGGUAGA m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-98-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7a-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7b-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7c-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7d-5p gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7e-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7f-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7g-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7i-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-2278 gCTGCTCTacctcca GAGAGCAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-3927-3p gctgcTCTACCTcca CAGGUAGA m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4451 gctgCTCTACCtcca UGGUAGAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4458 gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4468 gCTGCTCTacctcca AGAGCAGA m7a Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4500 gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4732-5p gctGCTCTACctcca UGUAGAGC m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-6831-5p gctgcTCTACCTcca UAGGUAGA m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-98-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHNE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7a-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7b-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7c-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7d-5p gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7e-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7f-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7g-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-let-7i-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-2278 gCTGCTCTacctcca GAGAGCAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-3927-3p gctgcTCTACCTcca CAGGUAGA m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4451 gctgCTCTACCtcca UGGUAGAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4458 gctgctCTACCTCca AGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4468 gCTGCTCTacctcca AGAGCAGA m7a Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4500 gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-4732-5p gctGCTCTACctcca UGUAGAGC m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-6831-5p gctgcTCTACCTcca UAGGUAGA m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709
hsa-miR-98-5p gctgctCTACCTCca UGAGGUAG m7b Disrupted HHHSE_20621_VEGFA|NM_001025366|exon_CDS|-6.00097257200869|1.36187378694709

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43771251A>C COSM1079672 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1206 acCATGAACtttctg UGUUCAUG m7b (m7b->m6b) HPRO6_65631_G78354.1_43739004
hsa-miR-3974 accaTGACCTTTctg AAAGGUCA m8a Created HPRO6_65631_G78354.1_43739004
hsa-miR-6730-5p accatgACCTTTCTg AGAAAGGU m8a Created HPRO6_65631_G78354.1_43739004

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43771132C>T COSM3669617 CHC614T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1538 cCCGGGCCtcgggcc CGGCCCGG m7b Disrupted HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-4747-3p ccCGGGCCTcgggcc AAGGCCCG m7b (m7b->m6b) HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-5008-5p cccGGGCCTCgggcc UGAGGCCC m7b Disrupted HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-1538 cCCGGGCCtcgggcc CGGCCCGG m7b Disrupted HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-4747-3p ccCGGGCCTcgggcc AAGGCCCG m7b (m7b->m6b) HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-5008-5p cccGGGCCTCgggcc UGAGGCCC m7b Disrupted HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-1538 cCCGGGCCtcgggcc CGGCCCGG m7b Disrupted HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-4747-3p ccCGGGCCTcgggcc AAGGCCCG m7b (m7b->m6b) HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-5008-5p cccGGGCCTCgggcc UGAGGCCC m7b Disrupted HHHNE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-1538 cCCGGGCCtcgggcc CGGCCCGG m7b Disrupted HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-4747-3p ccCGGGCCTcgggcc AAGGCCCG m7b (m7b->m6b) HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897
hsa-miR-5008-5p cccGGGCCTCgggcc UGAGGCCC m7b Disrupted HHHSE_20620_VEGFA|NM_001025366|exon_CDS|-5.12710430740383|0.778414975633897

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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