SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055428
Gene Symbol: VAMP8
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.85579123A>G COSM1669112 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1264 gggggAAGACTTGga CAAGUCUU m8a Created HHFCT_89104_uc002spt.2_1_12
hsa-miR-3679-3p GGGGGAAGacttgga CUUCCCCC m8a Created HHFCT_89104_uc002spt.2_1_12
hsa-miR-3691-3p gggggaaGACTTGGa ACCAAGUC m7b Created HHFCT_89104_uc002spt.2_1_12
hsa-miR-4446-5p ggGGGAAAacttgga AUUUCCCU m6b Disrupted HHFCT_89104_uc002spt.2_1_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85579103G>A COSM1615177 BN24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4661-3p gtggagcGGATCCTg CAGGAUCC m7b Disrupted HHFCT_89104_uc002spt.2_1_12
hsa-miR-4686 gtggAGCAGATcctg UAUCUGCU m7b Created HHFCT_89104_uc002spt.2_1_12
hsa-miR-572 gtgGAGCGGAtcctg GUCCGCUC m7b Disrupted HHFCT_89104_uc002spt.2_1_12
hsa-miR-6828-3p gtgGAGCAGATcctg AUCUGCUC m8a Created HHFCT_89104_uc002spt.2_1_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85579076A>C COSM1023372 TCGA-AP-A0L9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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