SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0017691
Gene Symbol: USP6NL
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.11606287T>A COSN6941725 8044180 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p aagagtaACTTTATt CAUAAAGU m7b Created HPHES_1139_G1513.1_11648284
hsa-miR-4662a-3p aagagTATCTTTatt AAAGAUAG m7a Disrupted HPHES_1139_G1513.1_11648284
hsa-miR-548at-5p aagagTAACTTTatt AAAAGUUA m7b Created HPHES_1139_G1513.1_11648284
hsa-miR-5590-3p aagagtaACTTTATt AAUAAAGU m7b Created HPHES_1139_G1513.1_11648284
hsa-miR-561-3p aagagtAACTTTatt CAAAGUUU m6b Created HPHES_1139_G1513.1_11648284

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11585100C>A COSN14542898 8069331 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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