SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_014688
Gene Symbol: USP6NL
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.11561702C>T COSN4691701 PD4248a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p gcatcTGCGCAaaag CUGCGCAA m6b Disrupted HPSLB_1070_G1306.1_11603700
hsa-miR-507 gcatctGTGCAAAAg UUUUGCAC m8a Created HPSLB_1070_G1306.1_11603700
hsa-miR-557 gcatctGTGCAAAag GUUUGCAC m7b Created HPSLB_1070_G1306.1_11603700
hsa-miR-5683 gCATCTGTgcaaaag UACAGAUG m7b Created HPSLB_1070_G1306.1_11603700

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11552755A>C COSN14863832 LP6005500-DNA_B03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-455-5p ataGGCACATtagaa UAUGUGCC m7b Created HHFKP_16042_cluster-2836_23_27
hsa-miR-4735-5p ataggcAAATTAGaa CCUAAUUU m7b Disrupted HHFKP_16042_cluster-2836_23_27
hsa-miR-4774-3p aTAGGCAAattagaa AUUGCCUA m7b Disrupted HHFKP_16042_cluster-2836_23_27
hsa-miR-550a-3-5p atAGGCACattagaa AGUGCCUG m6b Created HHFKP_16042_cluster-2836_23_27
hsa-miR-550a-5p atAGGCACattagaa AGUGCCUG m6b Created HHFKP_16042_cluster-2836_23_27
hsa-miR-550b-2-5p atAGGCACATtagaa AUGUGCCU m8a Created HHFKP_16042_cluster-2836_23_27
hsa-miR-8066 ataggCACATTagaa CAAUGUGA m6b Created HHFKP_16042_cluster-2836_23_27

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463569C>T COSM3434189 TCGA-EE-A3AG-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6871-5p gaaaaCTCCCATcgg CAUGGGAG m7b Disrupted HHFCT_16828_cluster-2836_26_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463564C>T COSM4824526 TCGA-JX-A3Q0-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-5p ctcccatTGGGTCCa GGACCCAC m7a Created HHFCT_16828_cluster-2836_26_8
hsa-miR-711 ctcccatTGGGTCCa GGGACCCA m7b Created HHFCT_16828_cluster-2836_26_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463529G>T COSM1321529 TCGA-29-1698-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-5p taatCACGCAGctgc CCUGCGUG m7b Disrupted HHFCT_16828_cluster-2836_26_8
hsa-miR-4765 taATCACTCAgctgc UGAGUGAU m8a Created HHFCT_16828_cluster-2836_26_8
hsa-miR-8062 tAATCACTcagctgc CAGUGAUU m7b Created HHFCT_16828_cluster-2836_26_8
hsa-miR-8077 taatcACTCAGCtgc GGCUGAGU m7b Created HHFCT_16828_cluster-2836_26_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463506C>T COSM3716696 SS6003302 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1256 atagCAATGCCactt AGGCAUUG m7b Created HPRO6_12079_G13969.1_11505493
hsa-miR-1256 atagCAATGCCactt AGGCAUUG m7b Created HPTK1_4793_G5616.1_11505492

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463505G>A COSM1232114 587238 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4694-5p tagcAACACCacttc AGGUGUUA m6b Created HPRO6_12079_G13969.1_11505493
hsa-miR-4694-5p tagcAACACCacttc AGGUGUUA m6b Created HPTK1_4793_G5616.1_11505492

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463496A>C COSM1288871 TARGET-30-PASFGG [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-5p cacttcACATATCAg UGAUAUGU m8a Created HPRO6_12079_G13969.1_11505493
hsa-miR-190b cacttcACATATCAg UGAUAUGU m8a Created HPRO6_12079_G13969.1_11505493
hsa-miR-3145-3p cacttcAAATATCag AGAUAUUU m7b Disrupted HPRO6_12079_G13969.1_11505493
hsa-miR-3611 caCTTCACAtatcag UUGUGAAG m7b (m6b->m7b) HPRO6_12079_G13969.1_11505493
hsa-miR-190a-5p cacttcACATATCAg UGAUAUGU m8a Created HPTK1_4793_G5616.1_11505492
hsa-miR-190b cacttcACATATCAg UGAUAUGU m8a Created HPTK1_4793_G5616.1_11505492
hsa-miR-3145-3p cacttcAAATATCag AGAUAUUU m7b Disrupted HPTK1_4793_G5616.1_11505492
hsa-miR-3611 caCTTCACAtatcag UUGUGAAG m7b (m6b->m7b) HPTK1_4793_G5616.1_11505492

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463489G>A COSM4401769 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 aataTCAGGAaggag CUCCUGAG m6b Disrupted HPRO6_12079_G13969.1_11505493
hsa-miR-1248 aatatcAAGAAGGag ACCUUCUU m7b Created HPRO6_12079_G13969.1_11505493
hsa-miR-3667-3p aatatcAGGAAGGag ACCUUCCU m7b Disrupted HPRO6_12079_G13969.1_11505493
hsa-miR-378a-5p aataTCAGGAaggag CUCCUGAC m6b Disrupted HPRO6_12079_G13969.1_11505493
hsa-miR-526b-5p aataTCAAGAaggag CUCUUGAG m6b Created HPRO6_12079_G13969.1_11505493
hsa-miR-6734-3p aatatcaGGAAGGag CCCUUCCC m6b Disrupted HPRO6_12079_G13969.1_11505493
hsa-miR-6868-3p aatatcaAGAAGGAg UUCCUUCU m7b Created HPRO6_12079_G13969.1_11505493
hsa-miR-1200 aataTCAGGAaggag CUCCUGAG m6b Disrupted HPTK1_4793_G5616.1_11505492
hsa-miR-1248 aatatcAAGAAGGag ACCUUCUU m7b Created HPTK1_4793_G5616.1_11505492
hsa-miR-3667-3p aatatcAGGAAGGag ACCUUCCU m7b Disrupted HPTK1_4793_G5616.1_11505492
hsa-miR-378a-5p aataTCAGGAaggag CUCCUGAC m6b Disrupted HPTK1_4793_G5616.1_11505492
hsa-miR-526b-5p aataTCAAGAaggag CUCUUGAG m6b Created HPTK1_4793_G5616.1_11505492
hsa-miR-6734-3p aatatcaGGAAGGag CCCUUCCC m6b Disrupted HPTK1_4793_G5616.1_11505492
hsa-miR-6868-3p aatatcaAGAAGGAg UUCCUUCU m7b Created HPTK1_4793_G5616.1_11505492

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463456C>A COSM537345 TCGA-75-6211-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-550a-3p aaaccGTAAGACgtc UGUCUUAC m7b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-200c-5p aaaccGTAAGACGtc CGUCUUAC m8a Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-550a-3p aaaccGTAAGACgtc UGUCUUAC m7b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-200c-5p aaaccGTAAGACGtc CGUCUUAC m8a Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463442A>G COSM465274 TCGA-B0-5705-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 ctcaGCTGCAGagag CCUGCAGC m7b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-1301-3p ctcAGCTGCAgagag UUGCAGCU m7b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-17-3p ctcagCTGCAGagag ACUGCAGU m6b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-20b-3p ctcagCTACAGagag ACUGUAGU m6b Disrupted HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-3137 ctcaGCTACAGAgag UCUGUAGC m8a Disrupted HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-3158-5p ctcagCTGCAGagag CCUGCAGA m6b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-5047 ctcAGCTGCAgagag UUGCAGCU m7b Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-7156-3p ctcaGCTGCAGagag CUGCAGCC m7a Created HHHNE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-1184 ctcaGCTGCAGagag CCUGCAGC m7b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-1301-3p ctcAGCTGCAgagag UUGCAGCU m7b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-17-3p ctcagCTGCAGagag ACUGCAGU m6b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-20b-3p ctcagCTACAGagag ACUGUAGU m6b Disrupted HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-3137 ctcaGCTACAGAgag UCUGUAGC m8a Disrupted HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-3158-5p ctcagCTGCAGagag CCUGCAGA m6b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-5047 ctcAGCTGCAgagag UUGCAGCU m7b Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551
hsa-miR-7156-3p ctcaGCTGCAGagag CUGCAGCC m7a Created HHHSE_20533_USP6NL|NM_001080491|exon_CDS|-5.6544272582967|-1.27661867275551

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463298C>T COSM914887 TCGA-D1-A0ZO-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4286 cgggaAGTGGGGctc ACCCCACU m7b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-4323 cgggaagTGGGGCTc CAGCCCCA m7b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-4758-3p cgggaaGTGGGGCtc UGCCCCAC m7b Created HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463286G>A COSM2053407 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5693 ctCCACTGCatcgca GCAGUGGC m7a (m7a->m6a) HHFKP_16039_cluster-2836_20_8
hsa-miR-6073 ctcCACTACatcgca GGUAGUGA m6b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-6499-3p ctcCACTGCatcgca AGCAGUGU m6b Disrupted HHFKP_16039_cluster-2836_20_8
hsa-miR-7852-3p ctccACTACATcgca UAUGUAGU m7b Created HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463282C>T COSM3806464 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p actgCATTGCAGtac CUGCAAUG m8a Created HHFKP_16039_cluster-2836_20_8
hsa-miR-4418 actgcatTGCAGTac CACUGCAG m6b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-6807-3p actgcatTGCAGTac CACUGCAU m6b Created HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463281G>A COSM1270117 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4318 ctgcatCACAGTacg CACUGUGG m6b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-4679 ctgcATCACAGtacg UCUGUGAU m7b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-4693-5p ctgcatCACAGTAcg AUACUGUG m7b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-892a ctgcatCACAGTacg CACUGUGU m6b Created HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463275C>T COSM4011675 TCGA-CD-A48A-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p cgcAGTATGacaacg ACAUACUU m6b Created HHFKP_16039_cluster-2836_20_8
hsa-miR-485-3p cgcaGTATGACaacg GUCAUACA m7a Created HHFKP_16039_cluster-2836_20_8
hsa-miR-489-5p cgcagTACGACaacg GGUCGUAU m6b Disrupted HHFKP_16039_cluster-2836_20_8
hsa-miR-6755-3p cgcagtaTGACAACg UGUUGUCA m7b Created HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463274G>A COSM3978091 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-5p gcaGTACAACAacgt UGUUGUAC m8a Created HHFKP_16039_cluster-2836_20_8
hsa-miR-489-5p gcagTACGACaacgt GGUCGUAU m6b Disrupted HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463269C>T COSM180863 TCGA-AA-3845-01 [large_intestine][colon][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-564 acgacaaCGTGCCag AGGCACGG m6b Disrupted HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463265C>T COSM2053406 SW48 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p caacgTGCCAGGccc ACCUGGCA m7b Disrupted HHFKP_16039_cluster-2836_20_8
hsa-miR-564 caaCGTGCCaggccc AGGCACGG m6b Disrupted HHFKP_16039_cluster-2836_20_8
hsa-miR-6730-3p caacGTGTCAGGccc CCUGACAC m8a Created HHFKP_16039_cluster-2836_20_8
hsa-miR-8073 caacgTGCCAGGccc ACCUGGCA m7b Disrupted HHFKP_16039_cluster-2836_20_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463195G>A COSM1345892 TCGA-CK-4950-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4731-5p agcCCCCAGCAtgcc UGCUGGGG m8a Created HHFKP_16038_cluster-2836_19_8
hsa-miR-5589-5p agccCCCAGCatgcc GGCUGGGU m6b Created HHFKP_16038_cluster-2836_19_8
hsa-miR-637 agCCCCCAGcatgcc ACUGGGGG m7b (m6b->m7b) HHFKP_16038_cluster-2836_19_8
hsa-miR-6784-5p agcCCCCGGCatgcc GCCGGGGC m7a Disrupted HHFKP_16038_cluster-2836_19_8
hsa-miR-6846-5p AGCCCCCAgcatgcc UGGGGGCU m8a Created HHFKP_16038_cluster-2836_19_8
hsa-miR-6848-5p AGCCCCCAgcatgcc UGGGGGCU m8a Created HHFKP_16038_cluster-2836_19_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463195CG>G COSM2053404 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6784-5p gaGCCCCGGCatgcc GCCGGGGC m8a Created HHFKP_16038_cluster-2836_19_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463128C>T COSM3434187 TCGA-GN-A267-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1261 aagTATCCAacaagt AUGGAUAA m6b Disrupted HHKTA_50840_NM_014688|2097|2136|1.34130617260447|0.218760814913006

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11463006A>C COSM4916384 TCGA-DD-A4NV-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5192 cacggaaACTCTCCc AGGAGAGU m7b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462994A>G COSM324228 2334202 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462990C>T COSM3434184 TCGA-GN-A269-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4496 aacacTTTCCTactg GAGGAAAC m6b Created HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-4747-5p aacaCTTCCCTactg AGGGAAGG m7a Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-5196-5p aacaCTTCCCTactg AGGGAAGG m7a Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-5584-5p aacacTTCCCTactg CAGGGAAA m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-6750-5p aacacTTCCCTactg CAGGGAAC m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-6822-5p aacacTTCCCTactg CAGGGAAC m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-8065 aacactTTCCTACtg UGUAGGAA m7b Created HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-9500 aacaCTTCCCTactg AAGGGAAG m7b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462983G>A COSM4011674 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-5p ccctACTGCCAacag UGGCAGUG m7a Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-34c-5p ccctACTGCCaacag AGGCAGUG m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-449a ccctACTGCCAacag UGGCAGUG m7a Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-449b-5p ccctACTGCCaacag AGGCAGUG m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-548au-3p ccctACTGCCAacag UGGCAGUU m7a Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006
hsa-miR-7150 ccctaCTGCCAacag CUGGCAGG m6b Disrupted HHKTA_47857_NM_014688|2234|2273|1.47110999575974|0.218760814913006

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462814C>A COSM4633120 HCT8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p gttgACACTGGtgct CCCAGUGU m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-199b-5p gttgACACTGGtgct CCCAGUGU m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-6733-3p gttGACACTGgtgct UCAGUGUC m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-767-5p gttgacaATGGTGCt UGCACCAU m7b Created HHFKP_16036_cluster-2836_17_12
hsa-miR-199a-5p gttgACACTGGtgct CCCAGUGU m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-199b-5p gttgACACTGGtgct CCCAGUGU m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-6733-3p gttGACACTGgtgct UCAGUGUC m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-767-5p gttgacaATGGTGCt UGCACCAU m7b Created HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462813T>A COSM683294 TCGA-22-5477-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p ttgACACTGGtgctg CCCAGUGU m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-199b-5p ttgACACTGGtgctg CCCAGUGU m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-29a-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-29b-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-29c-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHFKP_16036_cluster-2836_17_12
hsa-miR-592 tTGACACAggtgctg UUGUGUCA m7b Created HHFKP_16036_cluster-2836_17_12
hsa-miR-6733-3p ttGACACTGgtgctg UCAGUGUC m7b (m7b->m6b) HHFKP_16036_cluster-2836_17_12
hsa-miR-6804-3p ttgacaCAGGTGCtg CGCACCUG m7b Created HHFKP_16036_cluster-2836_17_12
hsa-miR-199a-5p ttgACACTGGtgctg CCCAGUGU m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-199b-5p ttgACACTGGtgctg CCCAGUGU m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-29a-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-29b-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-29c-3p ttgacacTGGTGCTg UAGCACCA m7b Disrupted HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-592 tTGACACAggtgctg UUGUGUCA m7b Created HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-6733-3p ttGACACTGgtgctg UCAGUGUC m7b (m7b->m6b) HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-6804-3p ttgacaCAGGTGCtg CGCACCUG m7b Created HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462794G>A COSM4535394 CSCC-6-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HHKTA_5256_NM_014688|2434|2473|12.0284876123885|0.218760814913006
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPKTA_9109_G9706.1_11504788
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPRO6_12078_G13968.1_11504789
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPRO8_2318_G2971.1_11504788
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPRT3_3969_G5193.1_11504788
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPSEF_3173_G3799.1_11504789
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPTA1_1797_G2467.1_11504788
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPTA3_2862_G4343.1_11504787
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPTK1_4792_G5615.1_11504787
hsa-miR-302f atattcgAGCAATTc UAAUUGCU m7b Created HPTK7_1208_G1681.1_11504788

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462753A>G COSM3997752 SNUH_G26_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p tcatTCCGCCagtgg AGGCGGAG m6b Created HHFCT_16826_cluster-2836_24_13
hsa-miR-3165 tcatTCCACCagtgg AGGUGGAU m6b Disrupted HHFCT_16826_cluster-2836_24_13
hsa-miR-4456 tcattCCACCAGtgg CCUGGUGG m7b Disrupted HHFCT_16826_cluster-2836_24_13
hsa-miR-4730 tcatTCCGCCAGtgg CUGGCGGA m8a Created HHFCT_16826_cluster-2836_24_13
hsa-miR-8071 tcatTCCACCagtgg CGGUGGAC m6b Disrupted HHFCT_16826_cluster-2836_24_13
hsa-miR-25-5p tcatTCCGCCagtgg AGGCGGAG m6b Created HHFKP_16035_cluster-2836_16_9
hsa-miR-3165 tcatTCCACCagtgg AGGUGGAU m6b Disrupted HHFKP_16035_cluster-2836_16_9
hsa-miR-4456 tcattCCACCAGtgg CCUGGUGG m7b Disrupted HHFKP_16035_cluster-2836_16_9
hsa-miR-4730 tcatTCCGCCAGtgg CUGGCGGA m8a Created HHFKP_16035_cluster-2836_16_9
hsa-miR-8071 tcatTCCACCagtgg CGGUGGAC m6b Disrupted HHFKP_16035_cluster-2836_16_9

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462742A>C COSM1345890 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6809-5p gtggattCCTTGCCa UGGCAAGG m7b Created HHFCT_16826_cluster-2836_24_13
hsa-miR-6830-5p gtggaTTCCTTGcca CCAAGGAA m7b Created HHFCT_16826_cluster-2836_24_13
hsa-miR-6809-5p gtggattCCTTGCCa UGGCAAGG m7b Created HHFKP_16035_cluster-2836_16_9
hsa-miR-6830-5p gtggaTTCCTTGcca CCAAGGAA m7b Created HHFKP_16035_cluster-2836_16_9

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462645A>G COSM3978090 759_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p gcaattTGCCAAaat CUUGGCAC m6b Created HPSD1_1355_G1764.1_11504634
hsa-miR-182-5p gcaatTTGCCAAAat UUUGGCAA m8a Created HPSD1_1355_G1764.1_11504634
hsa-miR-4470 gcaaTTTGCCAaaat UGGCAAAC m7a Created HPSD1_1355_G1764.1_11504634
hsa-miR-96-5p gcaattTGCCAAAat UUUGGCAC m7a Created HPSD1_1355_G1764.1_11504634

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462640A>G COSM304606 CRC-9 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-496 ttaccaaAATACTCa UGAGUAUU m7b Disrupted HPSD1_1355_G1764.1_11504634

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462619C>T COSM683297 TCGA-51-4081-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6841-5p caactcGTACCCTtt UAGGGUAC m7b Created HHFCT_16825_cluster-2836_23_8
hsa-miR-6841-5p caactcGTACCCTtt UAGGGUAC m7b Created HHFKP_16034_cluster-2836_15_71
hsa-miR-6841-5p caactcGTACCCTtt UAGGGUAC m7b Created HPSD1_1355_G1764.1_11504634
Mutation Mutation ID Sample Name Cancer Type
chr10:g.11462024A>G COSN6475665 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.11461797C>T COSN1471850 RK096_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3173-3p tCTCCTTTagctgtt AAAGGAGG m7a Created HHFCT_16816_cluster-2836_13_12
hsa-miR-4509 tctCCTTTAGctgtt ACUAAAGG m7b Created HHFCT_16816_cluster-2836_13_12
hsa-miR-3173-3p tCTCCTTTagctgtt AAAGGAGG m7a Created HHFKP_16027_cluster-2836_7_464
hsa-miR-4509 tctCCTTTAGctgtt ACUAAAGG m7b Created HHFKP_16027_cluster-2836_7_464

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11461393C>T COSN1471848 RK089_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-5p tGCACCTTAtcaggc UAAGGUGC m8a (m7a->m8a) HHKTA_35461_NM_014688|3834|3873|2.1201291115361|0.218760814913006
hsa-miR-18b-5p tGCACCTTAtcaggc UAAGGUGC m8a (m7a->m8a) HHKTA_35461_NM_014688|3834|3873|2.1201291115361|0.218760814913006
hsa-miR-3161 tgcacCTTATCAGgc CUGAUAAG m8a Created HHKTA_35461_NM_014688|3834|3873|2.1201291115361|0.218760814913006
hsa-miR-4502 tgcaccTCATCAGgc GCUGAUGA m7b Disrupted HHKTA_35461_NM_014688|3834|3873|2.1201291115361|0.218760814913006
hsa-miR-4735-3p tGCACCTTatcaggc AAAGGUGC m7b Created HHKTA_35461_NM_014688|3834|3873|2.1201291115361|0.218760814913006
hsa-miR-18a-5p tGCACCTTAtcaggc UAAGGUGC m8a (m7a->m8a) HPSEF_3169_G3795.1_11503404
hsa-miR-18b-5p tGCACCTTAtcaggc UAAGGUGC m8a (m7a->m8a) HPSEF_3169_G3795.1_11503404
hsa-miR-3161 tgcacCTTATCAGgc CUGAUAAG m8a Created HPSEF_3169_G3795.1_11503404
hsa-miR-4502 tgcaccTCATCAGgc GCUGAUGA m7b Disrupted HPSEF_3169_G3795.1_11503404
hsa-miR-4735-3p tGCACCTTatcaggc AAAGGUGC m7b Created HPSEF_3169_G3795.1_11503404

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11460656T>A COSN8639063 3030_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p tagatttATATATAt CUAUAUAU m7b Created HHFCT_16808_cluster-2836_4_8
hsa-miR-410-3p tagatttTTATATat AAUAUAAC m6b Disrupted HHFCT_16808_cluster-2836_4_8
hsa-miR-5011-5p tagattTATATATAt UAUAUAUA m8a Created HHFCT_16808_cluster-2836_4_8
hsa-miR-548c-3p taGATTTTTatatat CAAAAAUC m7b (m7b->m6b) HHFCT_16808_cluster-2836_4_8
hsa-miR-190a-3p tagatttATATATAt CUAUAUAU m7b Created HHFCT_16808_cluster-2836_4_8
hsa-miR-410-3p tagatttTTATATat AAUAUAAC m6b Disrupted HHFCT_16808_cluster-2836_4_8
hsa-miR-5011-5p tagattTATATATAt UAUAUAUA m8a Created HHFCT_16808_cluster-2836_4_8
hsa-miR-548c-3p taGATTTTTatatat CAAAAAUC m7b (m7b->m6b) HHFCT_16808_cluster-2836_4_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.11460606C>T COSN6961329 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p atATATATAcacaag CUAUAUAU m7b (m6b->m7b) HHFCT_16807_cluster-2836_3_10
hsa-miR-223-5p atatATACACacaag CGUGUAUU m6b Disrupted HHFCT_16807_cluster-2836_3_10
hsa-miR-5011-5p aTATATATAcacaag UAUAUAUA m8a (m7a->m8a) HHFCT_16807_cluster-2836_3_10
hsa-miR-6867-5p atatatACACACAag UGUGUGUG m7a Disrupted HHFCT_16807_cluster-2836_3_10
hsa-miR-190a-3p atATATATAcacaag CUAUAUAU m7b (m6b->m7b) HHFKP_16022_cluster-2836_2_13
hsa-miR-223-5p atatATACACacaag CGUGUAUU m6b Disrupted HHFKP_16022_cluster-2836_2_13
hsa-miR-5011-5p aTATATATAcacaag UAUAUAUA m8a (m7a->m8a) HHFKP_16022_cluster-2836_2_13
hsa-miR-6867-5p atatatACACACAag UGUGUGUG m7a Disrupted HHFKP_16022_cluster-2836_2_13
hsa-miR-190a-3p atATATATAcacaag CUAUAUAU m7b (m6b->m7b) HPKTA_9099_G9696.2_11502598
hsa-miR-223-5p atatATACACacaag CGUGUAUU m6b Disrupted HPKTA_9099_G9696.2_11502598
hsa-miR-5011-5p aTATATATAcacaag UAUAUAUA m8a (m7a->m8a) HPKTA_9099_G9696.2_11502598
hsa-miR-6867-5p atatatACACACAag UGUGUGUG m7a Disrupted HPKTA_9099_G9696.2_11502598
hsa-miR-190a-3p atATATATAcacaag CUAUAUAU m7b (m6b->m7b) HPRO6_12071_G13959.1_11502599
hsa-miR-223-5p atatATACACacaag CGUGUAUU m6b Disrupted HPRO6_12071_G13959.1_11502599
hsa-miR-5011-5p aTATATATAcacaag UAUAUAUA m8a (m7a->m8a) HPRO6_12071_G13959.1_11502599
hsa-miR-6867-5p atatatACACACAag UGUGUGUG m7a Disrupted HPRO6_12071_G13959.1_11502599
hsa-miR-190a-3p atATATATAcacaag CUAUAUAU m7b (m6b->m7b) HPSLC_2734_G3212.1_11502602
hsa-miR-223-5p atatATACACacaag CGUGUAUU m6b Disrupted HPSLC_2734_G3212.1_11502602
hsa-miR-5011-5p aTATATATAcacaag UAUAUAUA m8a (m7a->m8a) HPSLC_2734_G3212.1_11502602
hsa-miR-6867-5p atatatACACACAag UGUGUGUG m7a Disrupted HPSLC_2734_G3212.1_11502602

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser