SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0017700 |
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Gene Symbol: | UPF2 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955437G>A | COSM4012028 | TCGA-BR-4363-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5002-5p | aattACCAAATggtg | AAUUUGGU | m7b | Created | HPTA1_1799_G2469.1_11997434 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955374C>T | COSM4595616 | NOKSI | [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3159 | gtTAATCCTgatggc | UAGGAUUA | m7b | (m7b->m6b) | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-3159 | gtTAATCCTgatggc | UAGGAUUA | m7b | (m7b->m6b) | HPSEF_3177_G3804.1_11997384 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955356C>T | COSM3434587 | TCGA-D3-A51T-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4471 | ccaAGTTCCCtggac | UGGGAACU | m7b | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-4496 | ccaaGTTTCCTggac | GAGGAAAC | m7b | Created | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-4685-5p | ccaagttCCCTGGac | CCCAGGGC | m6b | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-665 | ccaagttTCCTGGac | ACCAGGAG | m6b | Created | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-6750-5p | ccaaGTTCCCTGgac | CAGGGAAC | m8a | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-6754-5p | ccaagtTCCCTGGac | CCAGGGAG | m7a | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-6822-5p | ccaaGTTCCCTGgac | CAGGGAAC | m8a | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-6837-5p | ccaagttCCCTGGac | ACCAGGGC | m6b | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-7113-5p | ccaagtTCCCTGGAc | UCCAGGGA | m8a | Disrupted | HHFCT_16847_cluster-2838_8_24 |
hsa-miR-8059 | ccaAGTTCCCtggac | GGGGAACU | m7b | Disrupted | HHFCT_16847_cluster-2838_8_24 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955264C>T | COSM915280 | TCGA-AX-A0J1-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-335-3p | cagtaaATGAAAAct | UUUUUCAU | m7b | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-4729 | cagTAAATGAaaact | UCAUUUAU | m7a | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-5696 | cagTAAATGAaaact | CUCAUUUA | m7b | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-579-3p | cagtAAATGAAaact | UUCAUUUG | m7a | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-664b-3p | cagtAAATGAAaact | UUCAUUUG | m7a | Created | HHFCT_16846_cluster-2838_7_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955263G>A | COSM915279 | TCGA-BS-A0UV-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11955246C>T | COSM1702059 | YUWAND | [skin][mucosal][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-300 | ttgtttcCTTGTATa | UAUACAAG | m7b | Disrupted | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-381-3p | ttgtttcCTTGTATa | UAUACAAG | m7b | Disrupted | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-4261 | tTGTTTCCTtgtata | AGGAAACA | m8a | (m8a->m7a) | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-4496 | ttGTTTCCTtgtata | GAGGAAAC | m7b | (m7b->m6b) | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-520d-5p | ttgtttCTTTGTAta | CUACAAAG | m7b | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-524-5p | ttgtttCTTTGTAta | CUACAAAG | m7b | Created | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-624-3p | ttgtttCCTTGTata | CACAAGGU | m6b | Disrupted | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-651-3p | ttgTTTCCTTgtata | AAAGGAAA | m7b | Disrupted | HHFCT_16846_cluster-2838_7_9 |
hsa-miR-6830-5p | ttgtTTCCTTGtata | CCAAGGAA | m7b | Disrupted | HHFCT_16846_cluster-2838_7_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.11936708C>T | COSM427130 | TCGA-AN-A04C-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3065-5p | accacTTTGTTGcta | UCAACAAA | m7b | Created | HPTA4_383_G1770.1_11978707 |
hsa-miR-4795-5p | aCCACTTCgttgcta | AGAAGUGG | m7b | Disrupted | HPTA4_383_G1770.1_11978707 |
hsa-miR-520g-3p | acCACTTTGTtgcta | ACAAAGUG | m8a | Created | HPTA4_383_G1770.1_11978707 |
hsa-miR-520h | acCACTTTGTtgcta | ACAAAGUG | m8a | Created | HPTA4_383_G1770.1_11978707 |
hsa-miR-891a-5p | accactTCGTTGCta | UGCAACGA | m7b | Disrupted | HPTA4_383_G1770.1_11978707 |