SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028135
Gene Symbol: UBE3B
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.109489938G>A COSM4202961 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4317 gaccaGCAATGaacc ACAUUGCC m6b Created HPRO6_19369_G22573.1_109927757
hsa-miR-6785-3p gaccaGCGATGaacc ACAUCGCC m6b Disrupted HPRO6_19369_G22573.1_109927757
hsa-miR-6853-3p gaccagcAATGAACc UGUUCAUU m7b Created HPRO6_19369_G22573.1_109927757
hsa-miR-4317 gaccaGCAATGaacc ACAUUGCC m6b Created HPRO6_19369_G22573.1_109927757
hsa-miR-6785-3p gaccaGCGATGaacc ACAUCGCC m6b Disrupted HPRO6_19369_G22573.1_109927757
hsa-miR-6853-3p gaccagcAATGAACc UGUUCAUU m7b Created HPRO6_19369_G22573.1_109927757
hsa-miR-4317 gaccaGCAATGaacc ACAUUGCC m6b Created HPRO6_19369_G22573.1_109927757
hsa-miR-6785-3p gaccaGCGATGaacc ACAUCGCC m6b Disrupted HPRO6_19369_G22573.1_109927757
hsa-miR-6853-3p gaccagcAATGAACc UGUUCAUU m7b Created HPRO6_19369_G22573.1_109927757

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109489937C>T COSM1298880 TCGA-CF-A3MI-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-653-3p cgaCCAGTGAtgaac UUCACUGG m7b Created HPRO6_19369_G22573.1_109927757
hsa-miR-6785-3p cgaccaGCGATGaac ACAUCGCC m6b Disrupted HPRO6_19369_G22573.1_109927757

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109488616G>A COSM1946527 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTA3_4782_G7324.1_109926411
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPCB1_9663_G12076.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTA3_4782_G7324.1_109926411
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTA3_4782_G7324.1_109926411
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPCB1_9663_G12076.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPCB1_9663_G12076.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTA3_4782_G7324.1_109926411
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTA3_4782_G7324.1_109926411
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPTK1_7559_G8923.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPCB1_9663_G12076.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPCB1_9663_G12076.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPKTA_14367_G15482.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO6_19368_G22572.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-4289 acctCACAATGCttg GCAUUGUG m8a Created HPRO8_3741_G4849.1_109926410
hsa-miR-1294 ACCTCACAatgcttg UGUGAGGU m8a Created HPTA3_4782_G7324.1_109926411

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109488612T>C COSM934824 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPCB1_9663_G12076.1_109926410
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPCB1_9663_G12076.1_109926410
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPCB1_9663_G12076.1_109926410
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPCB1_9663_G12076.1_109926410
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPCB1_9663_G12076.1_109926410
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPCB1_9663_G12076.1_109926410
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPKTA_14367_G15482.1_109926410
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPKTA_14367_G15482.1_109926410
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPKTA_14367_G15482.1_109926410
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPKTA_14367_G15482.1_109926410
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPKTA_14367_G15482.1_109926410
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPKTA_14367_G15482.1_109926410
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPRO6_19368_G22572.1_109926410
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPRO6_19368_G22572.1_109926410
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPRO6_19368_G22572.1_109926410
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPRO6_19368_G22572.1_109926410
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPRO6_19368_G22572.1_109926410
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPRO6_19368_G22572.1_109926410
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPRO8_3741_G4849.1_109926410
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPRO8_3741_G4849.1_109926410
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPRO8_3741_G4849.1_109926410
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPRO8_3741_G4849.1_109926410
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPRO8_3741_G4849.1_109926410
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPRO8_3741_G4849.1_109926410
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPTA3_4782_G7324.1_109926411
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPTA3_4782_G7324.1_109926411
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPTA3_4782_G7324.1_109926411
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPTA3_4782_G7324.1_109926411
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPTA3_4782_G7324.1_109926411
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPTA3_4782_G7324.1_109926411
hsa-let-7d-5p ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPTK1_7559_G8923.1_109926410
hsa-miR-1294 ctgtACCTCACgatg UGUGAGGU m7b Disrupted HPTK1_7559_G8923.1_109926410
hsa-miR-202-3p ctgTACCTCacgatg AGAGGUAU m6b Disrupted HPTK1_7559_G8923.1_109926410
hsa-miR-3677-3p ctgtacCCCACGAtg CUCGUGGG m7b Created HPTK1_7559_G8923.1_109926410
hsa-miR-4458 ctgTACCTCacgatg AGAGGUAG m6b Disrupted HPTK1_7559_G8923.1_109926410
hsa-miR-6742-5p ctgtACCCCACgatg AGUGGGGU m7b Created HPTK1_7559_G8923.1_109926410

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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