SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0023293
Gene Symbol: TPCN2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.69066568C>A COSN6611078 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6072 attGATGAGGctgtg UCCUCAUC m7b Created HHFKP_28769_cluster-3694_8_32
hsa-miR-6891-3p attGATGAGGctgtg CCCUCAUC m7b Created HHFKP_28769_cluster-3694_8_32

Mutation Mutation ID Sample Name Cancer Type
chr11:g.69066127A>G COSN6611076 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-5p tGGCCCTAAaccttg UUAGGGCC m8a (m8a->m7a) HHFKP_28768_cluster-3694_7_120
hsa-miR-2909 tgGCCCTAAaccttg GUUAGGGC m7b (m7b->m6b) HHFKP_28768_cluster-3694_7_120
hsa-miR-3127-5p tgGCCCTGAaccttg AUCAGGGC m7b (m6b->m7b) HHFKP_28768_cluster-3694_7_120
hsa-miR-3918 tGGCCCTGaaccttg ACAGGGCC m7b Created HHFKP_28768_cluster-3694_7_120
hsa-miR-4512 tGGCCCTGaaccttg CAGGGCCU m7a Created HHFKP_28768_cluster-3694_7_120
hsa-miR-6895-5p TGGCCCTGaaccttg CAGGGCCA m8a Created HHFKP_28768_cluster-3694_7_120
hsa-miR-7160-3p tGGCCCTGaaccttg CAGGGCCC m7a Created HHFKP_28768_cluster-3694_7_120

Mutation Mutation ID Sample Name Cancer Type
chr11:g.69062912C>G COSM4590830 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3154 ctccgtCCCTTCTtc CAGAAGGG m7b Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-4475 ctccGTCCCTTcttc CAAGGGAC m7b Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-7515 ctccgTCCCTTCTtc AGAAGGGA m8a Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-92b-5p ctCCGTCCCTtcttc AGGGACGG m8a Disrupted HHFKP_28765_cluster-3694_4_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.69062896C>T COSM1230138 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-3p gcGGATCCGccggct UCGGAUCC m7b (m7b->m6b) HHFKP_28765_cluster-3694_4_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.69062891G>A COSM1356590 TCGA-CM-6162-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 cccCTGCAGatccgc CCUGCAGC m6b Created HHFKP_28765_cluster-3694_4_11
hsa-miR-1205 ccCCTGCAGAtccgc UCUGCAGG m8a Created HHFKP_28765_cluster-3694_4_11
hsa-miR-127-3p cccctgcGGATCCGc UCGGAUCC m7b Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-17-3p cccCTGCAGatccgc ACUGCAGU m6b Created HHFKP_28765_cluster-3694_4_11
hsa-miR-1909-3p CCCCTGCGgatccgc CGCAGGGG m8a Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-3158-5p cccCTGCAGatccgc CCUGCAGA m6b Created HHFKP_28765_cluster-3694_4_11
hsa-miR-6511b-5p ccCCTGCAGatccgc CUGCAGGC m7a (m6a->m7a) HHFKP_28765_cluster-3694_4_11
hsa-miR-6722-3p CCCCTGCAgatccgc UGCAGGGG m8a Created HHFKP_28765_cluster-3694_4_11
hsa-miR-6886-5p ccCCTGCGGatccgc CCCGCAGG m7b (m7b->m6b) HHFKP_28765_cluster-3694_4_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.69062890C>T COSM931349 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1909-3p gCCCCTGCGgatccg CGCAGGGG m8a (m8a->m7a) HHFKP_28765_cluster-3694_4_11
hsa-miR-6722-3p gCCCCTGCggatccg UGCAGGGG m7b Disrupted HHFKP_28765_cluster-3694_4_11
hsa-miR-6886-5p gccCCTGCGGatccg CCCGCAGG m7b Disrupted HHFKP_28765_cluster-3694_4_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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