SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001114978
Gene Symbol: TP63
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.189869360C>T COSM3591197 TCGA-D9-A3Z3-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3134 atgacATCCATCAag UGAUGGAU m8a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-4534 atgacaTCCATCaag GGAUGGAG m6b Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-513b-3p aTGACATTcatcaag AAAUGUCA m7b Created HPCB3_15732_G21576.1_189587124
hsa-miR-8082 atgacaTCCATCAag UGAUGGAG m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-3134 atgacATCCATCAag UGAUGGAU m8a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-4534 atgacaTCCATCaag GGAUGGAG m6b Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-513b-3p aTGACATTcatcaag AAAUGUCA m7b Created HPCB3_15732_G21576.1_189587124
hsa-miR-8082 atgacaTCCATCAag UGAUGGAG m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-3134 atgacATCCATCAag UGAUGGAU m8a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-4534 atgacaTCCATCaag GGAUGGAG m6b Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-513b-3p aTGACATTcatcaag AAAUGUCA m7b Created HPCB3_15732_G21576.1_189587124
hsa-miR-8082 atgacaTCCATCAag UGAUGGAG m7a Disrupted HPCB3_15732_G21576.1_189587124

Mutation Mutation ID Sample Name Cancer Type
chr3:g.189869357C>T COSM729994 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p caGATGATatccatc CAUCAUCG m6b Created HPCB3_15732_G21576.1_189587124
hsa-miR-144-5p cagaTGATATCCatc GGAUAUCA m8a Created HPCB3_15732_G21576.1_189587124
hsa-miR-3201 cagatgATATCCatc GGGAUAUG m6b Created HPCB3_15732_G21576.1_189587124
hsa-miR-136-3p caGATGATatccatc CAUCAUCG m6b Created HPCB3_15732_G21576.1_189587124
hsa-miR-144-5p cagaTGATATCCatc GGAUAUCA m8a Created HPCB3_15732_G21576.1_189587124
hsa-miR-3201 cagatgATATCCatc GGGAUAUG m6b Created HPCB3_15732_G21576.1_189587124

Mutation Mutation ID Sample Name Cancer Type
chr3:g.189869355G>A COSM3591196 TCGA-FS-A1ZA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p tCCAGATGacatcca CAUCUGGG m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-3126-3p tCCAGATGacatcca CAUCUGGC m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-452-3p tcCAGATGAcatcca CUCAUCUG m7b (m7b->m6b) HPCB3_15732_G21576.1_189587124
hsa-miR-1298-3p tCCAGATGacatcca CAUCUGGG m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-3126-3p tCCAGATGacatcca CAUCUGGC m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-452-3p tcCAGATGAcatcca CUCAUCUG m7b (m7b->m6b) HPCB3_15732_G21576.1_189587124
hsa-miR-1298-3p tCCAGATGacatcca CAUCUGGG m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-3126-3p tCCAGATGacatcca CAUCUGGC m7a Disrupted HPCB3_15732_G21576.1_189587124
hsa-miR-452-3p tcCAGATGAcatcca CUCAUCUG m7b (m7b->m6b) HPCB3_15732_G21576.1_189587124

Mutation Mutation ID Sample Name Cancer Type
chr3:g.189678749C>T COSN9540870 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p tgtcatcCAAAACac AGUUUUGC m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-19b-1-5p tgtcatcCAAAACac AGUUUUGC m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-19b-2-5p tgtcatcCAAAACac AGUUUUGC m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-432-3p tgtCATCCAaaacac CUGGAUGG m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-4760-5p tgtcATCTAAAacac UUUAGAUU m7a Created HPCB3_15730_G21574.1_189396559
hsa-miR-5004-3p tgtcATCCAAaacac CUUGGAUU m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-6744-5p tGTCATCCAaaacac UGGAUGAC m8a (m8a->m7a) HPCB3_15730_G21574.1_189396559
hsa-miR-7850-5p tgtcaTCCAAAacac GUUUGGAC m6b Disrupted HPCB3_15730_G21574.1_189396559
hsa-miR-8061 tgtcATCTAAaacac CUUAGAUU m6b Created HPCB3_15730_G21574.1_189396559

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser