SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080430
Gene Symbol: TOX3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.52446149G>C COSM219660 PD4199a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-450b-3p aaagaaaGATCCCAa UUGGGAUC m7b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-4713-3p aaagaaaGATCCCAa UGGGAUCC m7a Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-5187-5p aaagaaaCATCCCAa UGGGAUGA m7a Created HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-638 aaagaaaGATCCCaa AGGGAUCG m6b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-6728-5p aaagaaaCATCCCAa UUGGGAUG m7b Created HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-769-3p aaagaaaGATCCCAa CUGGGAUC m7b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-450b-3p aaagaaaGATCCCAa UUGGGAUC m7b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-4713-3p aaagaaaGATCCCAa UGGGAUCC m7a Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-5187-5p aaagaaaCATCCCAa UGGGAUGA m7a Created HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-638 aaagaaaGATCCCaa AGGGAUCG m6b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-6728-5p aaagaaaCATCCCAa UUGGGAUG m7b Created HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-769-3p aaagaaaGATCCCAa CUGGGAUC m7b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-450b-3p aaagaaaGATCCCAa UUGGGAUC m7b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-4713-3p aaagaaaGATCCCAa UGGGAUCC m7a Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-5187-5p aaagaaaCATCCCAa UGGGAUGA m7a Created HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-638 aaagaaaGATCCCaa AGGGAUCG m6b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-6728-5p aaagaaaCATCCCAa UUGGGAUG m7b Created HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-769-3p aaagaaaGATCCCAa CUGGGAUC m7b Disrupted HHHNA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-450b-3p aaagaaaGATCCCAa UUGGGAUC m7b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-4713-3p aaagaaaGATCCCAa UGGGAUCC m7a Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-5187-5p aaagaaaCATCCCAa UGGGAUGA m7a Created HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-638 aaagaaaGATCCCaa AGGGAUCG m6b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-6728-5p aaagaaaCATCCCAa UUGGGAUG m7b Created HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747
hsa-miR-769-3p aaagaaaGATCCCAa CUGGGAUC m7b Disrupted HHHSA_8723_TOX3|NM_001080430|exon_CDS|-3.8545388319452|0.841430749890747

Mutation Mutation ID Sample Name Cancer Type
chr16:g.52446036T>G COSM2834768 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p cAAAAATGgtagcat UCAUUUUU m7b Created HPHES_3337_G4371.1_52479945
hsa-miR-187-5p caaaaaTTGTAGCat GGCUACAA m7b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-221-3p caaaaatTGTAGCat AGCUACAU m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-222-3p caaaaatTGTAGCat AGCUACAU m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-548v caaaaatTGTAGCat AGCUACAG m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-7849-3p caaaAATTGTagcat GACAAUUG m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-153-5p cAAAAATGgtagcat UCAUUUUU m7b Created HPHES_3337_G4371.1_52479945
hsa-miR-187-5p caaaaaTTGTAGCat GGCUACAA m7b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-221-3p caaaaatTGTAGCat AGCUACAU m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-222-3p caaaaatTGTAGCat AGCUACAU m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-548v caaaaatTGTAGCat AGCUACAG m6b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-7849-3p caaaAATTGTagcat GACAAUUG m6b Disrupted HPHES_3337_G4371.1_52479945

Mutation Mutation ID Sample Name Cancer Type
chr16:g.52446028C>G COSM1268329 ESO-721 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p gtagcaTCTATGTgg AACAUAGA m7b Disrupted HPHES_3337_G4371.1_52479945
hsa-miR-376c-3p gtagcaTCTATGTgg AACAUAGA m7b Disrupted HPHES_3337_G4371.1_52479945

Mutation Mutation ID Sample Name Cancer Type
chr16:g.52439888C>T COSM3510210 TCGA-EE-A3J5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 cctctctTCTTCTCa AGAGAAGA m7b Created HPCB3_8822_G12145.1_52473790
hsa-miR-185-5p ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-3185 cctctCTTCTTCTca AGAAGAAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-4306 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-4428 cctcTCTCCTTctca CAAGGAGA m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-4644 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-5197-3p cctCTCTTCTTctca AAGAAGAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-6770-5p cctctctCCTTCTCa UGAGAAGG m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-6856-5p CCTCTCTTcttctca AAGAGAGG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-1253 cctctctTCTTCTCa AGAGAAGA m7b Created HPCB3_8822_G12145.1_52473790
hsa-miR-185-5p ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-3185 cctctCTTCTTCTca AGAAGAAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-4306 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-4428 cctcTCTCCTTctca CAAGGAGA m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-4644 ccTCTCTCCttctca UGGAGAGA m7b (m7b->m6b) HPCB3_8822_G12145.1_52473790
hsa-miR-5197-3p cctCTCTTCTTctca AAGAAGAG m8a Created HPCB3_8822_G12145.1_52473790
hsa-miR-6770-5p cctctctCCTTCTCa UGAGAAGG m7b Disrupted HPCB3_8822_G12145.1_52473790
hsa-miR-6856-5p CCTCTCTTcttctca AAGAGAGG m8a Created HPCB3_8822_G12145.1_52473790

Mutation Mutation ID Sample Name Cancer Type
chr16:g.52439600GCAA>A COSM4735382 T3033 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-744-3p agcagcaGCAACAacaac CUGUUGCC m6b Disrupted HHFKP_53468_cluster-9083_1_18
hsa-miR-744-3p agcagcaGCAACAacaac CUGUUGCC m6b Disrupted HHFKP_53468_cluster-9083_1_18

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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